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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PLAUR Gene

protein-coding   GIFtS: 68
GCID: GC19M044150

plasminogen activator, urokinase receptor

 Explore 156 diseases affiliated with
PLAUR via our new
 Human Malady Compendium 
Biological research products
for PLAUR
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Plasminogen Activator, Urokinase Receptor1 2     U-Plasminogen Activator Receptor Form 22
UPAR1 2 3     Urokinase Plasminogen Activator Surface Receptor2
URKR1 2 5     Urokinase-Type Plasminogen Activator (UPA) Receptor2
CD871 2     MO33
Monocyte Activation Antigen Mo32 3     CD87 Antigen3
U-PAR2 3     UPAR1 2 3

External Ids:    HGNC: 90531   Entrez Gene: 53292   Ensembl: ENSG000000114227   OMIM: 1733915   UniProtKB: Q034053   

Export aliases for PLAUR gene to outside databases

Previous GC identifers: GC19M044796 GC19M044542 GC19M048826 GC19M048844 GC19M048842 GC19M040580


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PLAUR:
This gene encodes the receptor for urokinase plasminogen activator and, given its role in localizing and promoting
plasmin formation, likely influences many normal and pathological processes related to cell-surface plasminogen
activation and localized degradation of the extracellular matrix. It binds both the proprotein and mature forms of
urokinase plasminogen activator and permits the activation of the receptor-bound pro-enzyme by plasmin. The protein
lacks transmembrane or cytoplasmic domains and may be anchored to the plasma membrane by a
glycosyl-phosphatidylinositol (GPI) moiety following cleavage of the nascent polypeptide near its carboxy-terminus.
However, a soluble protein is also produced in some cell types. Alternative splicing results in multiple transcript
variants encoding different isoforms. The proprotein experiences several post-translational cleavage reactions that
have not yet been fully defined. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: UPAR_HUMAN, Q03405
Function: Acts as a receptor for urokinase plasminogen activator. Plays a role in localizing and promoting plasmin
formation. Mediates the proteolysis-independent signal transduction activation effects of U-PA. It is subject to
negative-feedback regulation by U-PA which cleaves it into an inactive form

Gene Wiki entry for PLAUR (Urokinase receptor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PLAUR gene promoter:
         STAT1   Sp1   STAT3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): PLAUR promoter sequence
   Search SABiosciences Chromatin IP Primers for PLAUR

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PLAUR


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13   Ensembl cytogenetic band:  19q13.31   HGNC cytogenetic band: 19q13

PLAUR Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PLAUR gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19M044150:  view genomic region     (about GC identifiers)

Start:
44,150,248 bp from pter      End:
44,174,502 bp from pter
Size:
24,255 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UPAR_HUMAN, Q03405 (See protein sequence)
Recommended Name: Urokinase plasminogen activator surface receptor precursor  
Size: 335 amino acids; 36978 Da
Subunit: Monomer (Probable). Interacts with MRC2. Interacts (via the UPAR/Ly6 domains) with SRPX2
Subcellular location: Isoform 1: Cell membrane; Lipid-anchor, GPI-anchor
Subcellular location: Isoform 2: Secreted (Probable)
6/7 PDB 3D structures from and Proteopedia for PLAUR (see all 7):
1YWH (3D)        2FD6 (3D)        2I9B (3D)        3BT1 (3D)        3BT2 (3D)        3U73 (3D)    
Secondary accessions: A8K409 Q12876 Q15845 Q16887 Q6IB52 Q9BWT0 Q9NYC8 Q9UD69 Q9UEA6 Q9UM92 Q9UMV0
Alternative splicing: 3 isoforms:  Q03405-1   Q03405-2   Q03405-3   

Explore the universe of human proteins at neXtProt for PLAUR: NX_Q03405

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q03405

  • PLAUR Protein expression data from MOPED and PaxDb:    About this image 
    PLAUR Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_001005376.1  NP_001005377.1  NP_002650.1  

    ENSEMBL proteins: 
     ENSP00000342049   ENSP00000339328   ENSP00000221264  
    Reactome Protein details: Q03405
    Human Recombinant Protein Products for PLAUR: 
    Browse Purified and Recombinant Proteins at EMD Millipore
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    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: PLAUR
    OriGene Protein Over-expression Lysate (see all 5): PLAUR
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    Novus Biologicals PLAUR Lysate
    Sino Biological Recombinant Protein for PLAUR
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for PLAUR

    Gene Ontology (GO): 5/9 cellular component terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region IEA--
    GO:0005788endoplasmic reticulum lumen TAS--
    GO:0005789endoplasmic reticulum membrane TAS--
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IEA--

    PLAUR for ontologies           About GeneDecksing



    PLAUR Antibody Products: 
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    Uscn ELISAs and CLIAs for PLAUR


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PLAUR for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR018363 CD59_antigen_CS
     IPR016054 LY6_UPA_recep-like
     IPR001526 LY6_UPAR

    Graphical View of Domain Structure for InterPro Entry Q03405

    ProtoNet protein and cluster: Q03405

    2 Blocks protein families:
    IPB001526 CD59 antigen
    IPB003631 Urokinase plasminogen activator surface receptor


    UniProtKB/Swiss-Prot: UPAR_HUMAN, Q03405
    Similarity: Contains 3 UPAR/Ly6 domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: UPAR_HUMAN, Q03405
    Function: Acts as a receptor for urokinase plasminogen activator. Plays a role in localizing and promoting plasmin
    formation. Mediates the proteolysis-independent signal transduction activation effects of U-PA. It is subject to
    negative-feedback regulation by U-PA which cleaves it into an inactive form

         Genatlas biochemistry entry for PLAUR:
    plasminogen activator urokinase receptor,significantly diminished in diffuse type gastric carcinoma

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity NAS1689240
    GO:0005515protein binding IPI18718938
    GO:0019899enzyme binding IPI14688365
    GO:0030377U-plasminogen activator receptor activity NAS1689240
         
    PLAUR for ontologies           About GeneDecksing


    Phenotypes:
         6 GenomeRNAi human phenotypes for PLAUR:
     Decreased G3BP1 protein expres  G0/1 arrest  Increased G1 DNA content  Increased cell death HMECs cel 
     Synthetic lethal with Ras  Upregulation of Wnt/beta-caten 

         12 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Plaur):
     behavior/neurological  cardiovascular system  cellular  growth/size  hematopoietic system 
     homeostasis/metabolism  immune system  liver/biliary system  muscle  nervous system 
     renal/urinary system  respiratory system 

    PLAUR for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for PLAUR: Plaurtm1Jld Plaurtm1Mlg
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for PLAUR 

    miRNA
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    miRTarBase miRNAs that target PLAUR:
    hsa-mir-204 (MIRT005839)

    OriGene 3'-UTR Clone (see all 3): PLAUR
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PLAUR
    5 QIAGEN miScript miRNA Assays for microRNAs that regulate PLAUR:
    hsa-miR-3163 hsa-miR-4283 hsa-miR-544b hsa-miR-377 hsa-miR-3120-3p
    SwitchGear 3'UTR luciferase reporter plasmidPLAUR 3' UTR sequence
    Inhib. RNA
    Products:
        
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PLAUR (see all 7)
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    OriGene siRNA: PLAUR
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    Sirion Biotech Custom design and validation of potent shRNA sequences against PLAUR 

    Gene Editing
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    Sirion Biotech Customized adenovirus for overexpression of PLAUR 
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    Clone
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    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
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    GenScript: all cDNA clones in your preferred vector (see all 3): PLAUR (NM_002659)
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    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PLAUR
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PLAUR 

    Cell Line
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    GenScript Custom overexpressing Cell Line Services for PLAUR
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    Sirion Biotech Customized inducible overexpressing cell line services for PLAUR

    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PLAUR


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/17 super-pathways (see all 17About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Cell adhesion_ECM remodeling
    Cell adhesion ECM remodeling1.00
    Cell adhesion_ECM remodeling1.00
    2Complement and coagulation cascades
    Complement and coagulation cascades1.00
    Complement and Coagulation Cascades0.72
    3Development_CNTF receptor signaling
    Cell adhesion PLAU signaling0.35
    Cell adhesion_PLAU signaling0.35
    4Asparagine N-linked glycosylation
    Post-translational protein modification0.44
    Metabolism of proteins0.15
    5Adhesion
    Adhesion1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for PLAUR
        Cell adhesion PLAU signaling
    Cell adhesion ECM remodeling

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PLAUR
        Glioma Invasiveness
    UPA-UPAR Pathway
    WNT Signaling

    1 Cell Signaling Technology (CST) Pathway for PLAUR
        Adhesion

    3 GeneGo (Thomson Reuters) Pathways for PLAUR
        Development VEGF signaling via VEGFR2 - generic cascades
    Cell adhesion PLAU signaling
    Cell adhesion ECM remodeling

    5 BioSystems Pathways for PLAUR 
        Complement and Coagulation Cascades
    amb2 Integrin signaling
    FGF signaling pathway
    Arf6 downstream pathway
    Validated transcriptional targets of AP1 family members Fra1 and Fra2

    5/6        Reactome Pathways for PLAUR (see all 6)
        Hemostasis
    Attachment of GPI anchor to uPAR
    Dissolution of Fibrin Clot
    Metabolism of proteins
    Post-translational modification: synthesis of GPI-anchored proteins


    1         Kegg Pathway  (Kegg details for PLAUR):
        Complement and coagulation cascades


    PLAUR for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PLAUR

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/69 Interacting proteins for PLAUR (Q034052, 3 ENSP000003393284) via UniProtKB, MINT, STRING, and/or I2D (see all 69)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PFN2P350802, 3MINT-64050 I2D: score=5 
    SURF2Q155272, 3, ENSP000003610324MINT-64051 I2D: score=4 STRING: ENSP00000361032
    TYK2P295973, ENSP000002648184I2D: score=4 STRING: ENSP00000264818
    IL6STP401893, ENSP000003387994I2D: score=3 STRING: ENSP00000338799
    LRP1Q079543, ENSP000002430774I2D: score=3 STRING: ENSP00000243077
    About this table

    Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006501C-terminal protein lipidation TAS--
    GO:0006928cellular component movement NAS1689240
    GO:0006935chemotaxis TAS10749881
    GO:0007165signal transduction TAS10749881
    GO:0007596blood coagulation TAS--

    PLAUR for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PLAUR for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PLAUR

    5 DrugBank Compounds for PLAUR    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    UrokinaseU-plasminogen activator (see all 3)9039-53-6target--14688365 12817472 17327908 12615913 14679304 14720519
    Tenecteplaset- PA (see all 4)191588-94-0target--12210068 11447759 15231724
    Alteplaset-PA (see all 4)105857-23-6target--17139284 17016423
    Anistreplaset- PA (see all 4)81669-57-0target--17139284 17016423
    Reteplaset- PA (see all 4)133652-38-7target--17139284 17016423

    10/103 Novoseek chemical compound relationships for PLAUR gene (see all 103)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    matrigel 77.5 40 10599442 (5), 15302576 (2), 8187097 (2), 10591631 (1) (see all 25)
    kininogen 73.6 18 14764580 (2), 11414365 (1), 12944405 (1), 15044324 (1) (see all 13)
    serine 63.4 81 12790317 (2), 18508598 (2), 9191470 (1), 9198168 (1) (see all 62)
    aprotinin 51.5 11 11422178 (2), 7962113 (1), 8601593 (1), 11169951 (1) (see all 7)
    glycolipid 49 23 1325906 (3), 7615819 (1), 8392005 (1), 7548000 (1) (see all 10)
    p-amino benzamidine 47.9 3 9872599 (1), 11804183 (1)
    mannose 6-phosphate 47.8 17 12665524 (2), 18220730 (1), 15085180 (1), 9566979 (1) (see all 9)
    pimonidazole 46.3 4 14729600 (1), 15781654 (1), 11912164 (1)
    vegf 44.1 102 16810742 (7), 12708473 (5), 7730348 (4), 16088182 (4) (see all 35)
    epsilon aminocaproic acid 39 3 7962113 (1), 11169951 (1), 10090848 (1)

    Search CenterWatch for drugs/clinical trials and news about PLAUR / UPAR 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PLAUR gene (3 alternative transcripts): 
    NM_001005376.2  NM_001005377.2  NM_002659.3  

    Unigene Cluster for PLAUR:

    Plasminogen activator, urokinase receptor
    Hs.466871  [show with all ESTs]
    Unigene Representative Sequence: BM554045
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000339082(uc002oxd.2) ENST00000340093(uc002oxf.2) ENST00000221264(uc002oxg.2)


    miRNA
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    5 QIAGEN miScript miRNA Assays for microRNAs that regulate PLAUR:
    hsa-miR-3163 hsa-miR-4283 hsa-miR-544b hsa-miR-377 hsa-miR-3120-3p
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    Inhib. RNA
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    Sirion Biotech Custom design and validation of potent shRNA sequences against PLAUR 
    Clone
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    Primer
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PLAUR
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PLAUR

    Additional cDNA sequence: 

    AF257789.1 AK290774.1 AY029180.1 BC002788.2 CR456952.1 M83246.1 U08839.1 U09347.1 
    X51675.1 X74039.1 

    14 DOTS entries:

    DT.454959  DT.99968496  DT.100797888  DT.97803353  DT.75101350  DT.95276935  DT.99930521  DT.121442407 
    DT.40228927  DT.91940708  DT.95257090  DT.75148085  DT.92431704  DT.95276939 

    24/289 AceView cDNA sequences (see all 289):

    CR601067 BM767461 CA426359 CD364814 BM914922 CR606767 CK821016 F05423 
    BM673224 BF433323 CD370941 U09347 BM719074 CB148651 CD368062 AA379455 
    CF126247 AI570820 BQ647008 CA307585 BI793096 AL710258 CA307155 CD672247 

    GeneLoc Exon Structure

    5/11 Alternative Splicing Database (ASD) splice patterns (SP) for PLAUR (see all 11)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b ^ 10a · 10b · 10c ^ 11a · 11b
    SP1:                                -     -     -     -     -                       -     -                                                               
    SP2:                                -     -     -     -     -                       -     -                                   -     -     -               
    SP3:                                -     -     -     -     -                       -     -                 -                                             
    SP4:                                -     -     -     -     -                       -     -                       -     -                                 
    SP5:                                -     -     -     -     -           -     -     -     -                                   -     -     -               


    ECgene alternative splicing isoforms for PLAUR

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PLAUR expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AACCACATTG
    PLAUR Expression
    About this image

    PLAUR expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    AdiposeVisceral White AdiposeAdipose
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ progenitor EN13 (Embryonic Progenitor Cell)

    See PLAUR Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PLAUR

    SOURCE GeneReport for Unigene cluster: Hs.466871

    UniProtKB/Swiss-Prot: UPAR_HUMAN, Q03405
    Tissue specificity: Expressed in neurons of the rolandic area of the brain (at protein level). Expressed in the brain

        SABiosciences Expression via Pathway-Focused PCR Arrays including PLAUR: 
              WNT Signaling Targets in human mouse rat
              Wound Healing in human mouse rat
              Tumor Metastasis in human mouse rat
              Cell Motility in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for PLAUR gene from 3/8 species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Plaur1 , 5 plasminogen activator, urokinase receptor1, 5 69.75(n)1
    63.27(a)1
      7 (10.92 cM)5
    187931  NM_011113.31  NP_035243.11 
     244625005 
    lizard
    (Anolis carolinensis)
    Reptilia PLAUR6
    --
    33(a)
    1 ↔ 1
    LGf(966826-972159)
    zebrafish
    (Danio rerio)
    Actinopterygii CABZ01063789.16
    BX927369.46
    (see all 9)
    --
    25(a)
    25(a)
    (see all 9)
    many → 1
    many → 1
    (see all 9)
    17(49629200-49636494)
    17(49721512-49724024)


    ENSEMBL Gene Tree for PLAUR (if available)
    TreeFam Gene Tree for PLAUR (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/604 NCBI SNPs in PLAUR are shown (see all 604    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs116723621,2
    C,H--40580485(+) tgatcC/Tgcccg 1 -- ds50011Minor allele frequency- T:0.00NA 2
    rs1122715491,2
    C--40580577(+) TGTAAA/GATTTG 1 -- ds50010--------
    rs1123950731,2
    F--40581419(+) ACAGAC/TCTCAC 1 -- int13Minor allele frequency- T:0.05CSA WA 122
    rs759139691,2
    C,F--40581449(+) GACAGG/TTGGTG 1 -- int14Minor allele frequency- T:0.06CSA WA NA 242
    rs791197371,2
    C--40581769(+) CACCTT/CGGCCT 1 -- int12Minor allele frequency- C:0.00WA CSA 3
    rs1136681311,2
    --40581818(+) CAGCCG/AAAGAT 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs1132463011,2
    --40581916(+) CATGAG/ATTTTT 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs42519531,2
    C,F,H--40582111(-) GAGACG/AGATAG 1 -- int121Minor allele frequency- A:0.04NS EA NA WA 2286
    rs42519371,2
    C,F--40582273(-) GCCACC/TGTGCC 1 -- int12Minor allele frequency- T:0.04NS 92
    rs42519521,2
    C,F--40582284(-) tacagG/Acatga 1 -- int12Minor allele frequency- A:0.04NS 92

    HapMap Linkage Disequilibrium report for PLAUR (44150248 - 44174502 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for PLAUR
         1 Indel: 102848
    Human Gene Mutation Database (HGMD): PLAUR

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PLAUR for disorders           About GeneDecksing

    OMIM gene information: 173391    OMIM disorders: --

    20/156 diseases for PLAUR (see all 156):    About MalaCards
    paroxysmal nocturnal hemoglobinuria    hepatocellular carcinoma (fibrolamellar variant)    aids dementia complex    pemphigus foliaceus
    pemphigus vulgaris    non-small cell lung carcinoma    ureter carcinoma    paranasal sinus disease
    central nervous system disease    pemphigus    common variable immunodeficiency    heart block
    nervous system disease    congenital heart block    malignant pleural mesothelioma    squamous cell carcinoma
    giant cell tumor    soft tissue sarcoma    hemoglobinuria    severe combined immunodeficiency

    2 diseases from the University of Copenhagen DISEASES database for PLAUR:
    Breast cancer     Carcinoma

    10/97 Novoseek disease relationships for PLAUR gene (see all 97)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    metastasis 73.6 353 19050704 (5), 18399120 (5), 17264329 (4), 11912164 (4) (see all 99)
    tumors 66.8 802 15172186 (7), 17549400 (6), 9102229 (6), 10090848 (6) (see all 99)
    cancer 66.3 398 14595671 (5), 9137501 (4), 11223863 (3), 15279614 (3) (see all 99)
    ureter carcinoma 63.3 2 15191676 (1), 14981816 (1)
    breast cancer 55.1 180 14527916 (5), 10934293 (5), 12967140 (5), 7768629 (4) (see all 86)
    glioblastoma 54.5 72 7747809 (5), 18819934 (5), 9219733 (4), 11234878 (3) (see all 23)
    colon cancer 48.5 65 14977859 (6), 9191056 (4), 15004225 (3), 19782465 (3) (see all 23)
    ovarian cancer 47.7 56 9581823 (3), 17891393 (3), 14563447 (3), 19395996 (3) (see all 24)
    cancer invasiveness 47 5 14977859 (2), 11079728 (1), 9794194 (1)
    paroxysmal hemoglobinuria nocturnal 45.1 12 9114600 (2), 1325906 (1), 15182554 (1), 18954937 (1) (see all 6)

    Human Genome Epidemiology (HuGE) Navigator: PLAUR (19 documents)

    Export disorders for PLAUR gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PLAUR gene, integrated from 9 sources (see all 1271):
    (articles sorted by number of sources associating them with PLAUR)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. cDNA for Mo3, a monocyte activation antigen, encodes the human receptor for urokinase plasminogen activator. (PubMed id 1316922)1, 2, 9 Min H.Y.... Liu D.Y. (1992)
    2. Crystal structure of the human urokinase plasminogen activator receptor bound to an antagonist peptide. (PubMed id 15861141)1, 2, 9 Llinas P.... Menez A. (2005)
    3. Proteolytic regulation of the urokinase receptor/CD87 on monocytic cells by neutrophil elastase and cathepsin G. (PubMed id 14688365)1, 7, 9 Beaufort N....Pidard D. (2004)
    4. Cell-surface acceleration of urokinase-catalyzed receptor cleavage. (PubMed id 9030717)1, 2, 9 Hoeyer-Hansen G.... Danoe K. (1997)
    5. The structure of the urokinase-type plasminogen activator receptor gene. (PubMed id 8049431)1, 2, 9 Casey J.R.... Rosse W.F. (1994)
    6. An alternatively spliced variant of mRNA for the human receptor for urokinase plasminogen activator. (PubMed id 8392005)1, 2, 9 Pyke C.... Danoe K. (1993)
    7. Localization of the disulfide bonds in the NH2-terminal domain of the cellular receptor for human urokinase-type plasminogen activator. A domain structure belonging to a novel superfamily of glycolipid- anchored membrane proteins. (PubMed id 8394346)1, 2, 9 Ploug M.... Danoe K. (1993)
    8. Epileptic and developmental disorders of the speech cortex: ligand/receptor interaction of wild-type and mutant SRPX2 with the plasminogen activator receptor uPAR. (PubMed id 18718938)1, 2 Royer-Zemmour B....Szepetowski P. (2008)
    9. Identification of uPAR-positive chemoresistant cells in small cell lung cancer. (PubMed id 17327908)1, 7 Gutova M....Aboody K.S. (2007)
    10. Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol- anchored proteins released upon phospholipase D treatment. (PubMed id 16602701)1, 2 Elortza F.... Jensen O.N. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5329 HGNC: 9053 AceView: PLAUR Ensembl:ENSG00000011422 euGenes: HUgn5329
    ECgene: PLAUR Kegg: 5329 H-InvDB: PLAUR

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PLAUR Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for PLAUR Genetics and Cytogenetics in Oncology and Haematology
    SeattleSNPshttp://pga.gs.washington.edu/data/plaur/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PLAUR gene:
    Search GeneIP for patents involving PLAUR

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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