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Aliases for PKD1P6 Gene

Aliases for PKD1P6 Gene

  • Polycystin 1, Transient Receptor Potential Channel Interacting Pseudogene 6 2 3
  • Polycystic Kidney Disease 1 (Autosomal Dominant) Pseudogene 6 2 3 5
  • GPS, PLAT And Transmembrane Domain-Containing Protein 3
  • HG6 3

External Ids for PKD1P6 Gene

Previous GeneCards Identifiers for PKD1P6 Gene

  • GC16U900294
  • GC16M015185
  • GC16M015106
  • GC16M015126
  • GC16M015199
  • GC16M015219
  • GC16M015202

Summaries for PKD1P6 Gene

GeneCards Summary for PKD1P6 Gene

PKD1P6 (Polycystin 1, Transient Receptor Potential Channel Interacting Pseudogene 6) is a Pseudogene. Diseases associated with PKD1P6 include kidney disease.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PKD1P6 Gene

Genomics for PKD1P6 Gene

Regulatory Elements for PKD1P6 Gene

Enhancers for PKD1P6 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around PKD1P6 on UCSC Golden Path with GeneCards custom track

Promoters for PKD1P6 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around PKD1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for PKD1P6 Gene

Chromosome:
16
Start:
15,104,723 bp from pter
End:
15,154,564 bp from pter
Size:
49,842 bases
Orientation:
Minus strand

Genomic View for PKD1P6 Gene

Genes around PKD1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PKD1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PKD1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PKD1P6 Gene

Proteins for PKD1P6 Gene

Post-translational modifications for PKD1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PKD1P6 Gene

Domains & Families for PKD1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PKD1P6 Gene

Function for PKD1P6 Gene

Phenotypes for PKD1P6 Gene

GenomeRNAi human phenotypes for PKD1P6:
genes like me logo Genes that share phenotypes with PKD1P6: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PKD1P6 Gene

Localization for PKD1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PKD1P6 Gene

Pathways & Interactions for PKD1P6 Gene

SuperPathways for PKD1P6 Gene

No Data Available

Interacting Proteins for PKD1P6 Gene

Gene Ontology (GO) - Biological Process for PKD1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PKD1P6 Gene

Drugs & Compounds for PKD1P6 Gene

No Compound Related Data Available

Transcripts for PKD1P6 Gene

mRNA/cDNA for PKD1P6 Gene

(1) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PKD1P6 Gene

No ASD Table

Relevant External Links for PKD1P6 Gene

GeneLoc Exon Structure for
PKD1P6
ECgene alternative splicing isoforms for
PKD1P6

Expression for PKD1P6 Gene

mRNA expression in normal human tissues for PKD1P6 Gene

Protein differential expression in normal tissues from HIPED for PKD1P6 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from for PKD1P6 Gene



genes like me logo Genes that share expression patterns with PKD1P6: view

Protein tissue co-expression partners for PKD1P6 Gene

- Elite partner

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for PKD1P6 Gene

Orthologs for PKD1P6 Gene

Evolution for PKD1P6 Gene

ENSEMBL:
Gene Tree for PKD1P6 (if available)
TreeFam:
Gene Tree for PKD1P6 (if available)

No data available for Orthologs for PKD1P6 Gene

Paralogs for PKD1P6 Gene

No data available for Paralogs for PKD1P6 Gene

Variants for PKD1P6 Gene

Relevant External Links for PKD1P6 Gene

HapMap Linkage Disequilibrium report
PKD1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PKD1P6 Gene

Disorders for PKD1P6 Gene

MalaCards: The human disease database

(1) MalaCards diseases for PKD1P6 Gene - From: GeneCards

Disorder Aliases PubMed IDs
kidney disease
  • nephropathy
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for PKD1P6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
PKD1P6
genes like me logo Genes that share disorders with PKD1P6: view

No data available for UniProtKB/Swiss-Prot and Genatlas for PKD1P6 Gene

Publications for PKD1P6 Gene

  1. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus B.J. … Adams M.D. (Genomics 1999) 2 3 67
  2. The polycystic kidney disease 1 gene encodes a 14 kb transcript and lies within a duplicated region on chromosome 16. (PMID: 8004675) Ward C.J. … Halley D.J.J. (Cell 1994) 2 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for PKD1P6 Gene

Sources for PKD1P6 Gene

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