PIWIL3 Gene
protein-coding GIFtS: 49
GCID: GC22M025115
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piwi-like RNA-mediated gene silencing 3(Previous name: piwi-like 3 (Drosophila) )
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Aliases
for PIWIL3 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Piwi-Like RNA-Mediated Gene Silencing 31 2 | | HIWI31 2 | | Piwi-Like 3 (Drosophila)1 | | Piwi-Like 32 | | Piwi-Like Protein 32 |
Export aliases for PIWIL3 gene to outside databasesPrevious GC identifers: GC00U991200 GC22M023442 GC22M008063 |
Summaries
for PIWIL3 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for PIWIL3:
This gene encodes a member of the PIWI subfamily of Argonaute family proteins. This subfamily of proteins contains aPAZ domain, found in proteins involved in RNA-mediated gene silencing, and a C-terminal Piwi domain. The encodedprotein is thought to function in maintenance of germline cells. Multiple transcript variants encoding differentisoforms have been found for this gene. (provided by RefSeq, Dec 2011)
UniProtKB/Swiss-Prot: PIWL3_HUMAN, Q7Z3Z3Function: May play a role during spermatogenesis by repressing transposable elements and prevent their mobilization,which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression oftransposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern themethylation and subsequent repression of transposons. Directly binds piRNAs, a class of 24 to 30 nucleotide RNAs thatare generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequenceelements. Besides their function in transposable elements repression, piRNAs are probably involved in other processesduring meiosis such as translation regulation (By similarity)
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Genomic Views
for PIWIL3 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000022.10 NC_018933.1 NT_011520.12
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the PIWIL3 gene promoter:
COUP-TF1 TBP Pbx1a AML1a NRSF form 1 COUP NRSF form 2 HNF-4alpha1 COUP-TF IRF-7A
Other transcription factors
Search SABiosciences Chromatin IP Primers for PIWIL3
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PIWIL3 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 22q11.23 Ensembl cytogenetic band: 22q11.23 HGNC cytogenetic band: 22q11.23PIWIL3 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22M025115: view genomic region
(about GC identifiers)
Start:
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25,115,001 bp from pter |
End:
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25,170,687 bp from pter |
Size:
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55,687 bases |
Orientation:
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minus strand |
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Proteins
for PIWIL3 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: PIWL3_HUMAN, Q7Z3Z3 (See
protein sequence)Recommended Name: Piwi-like protein 3 Size: 882 amino acids; 101089 Da
Subcellular location: Cytoplasm. Note=Probable component of the meiotic nuage, also named P granule, agerm-cell-specific organelle required to repress transposon during meiosis (By similarity)Explore the universe of human proteins at neXtProt for PIWIL3: NX_Q7Z3Z3
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q7Z3Z3
PIWIL3 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (2 alternative transcripts):
NP_001008496.2 NP_001242904.1
ENSEMBL proteins: ENSP00000330031 ENSP00000431843 ENSP00000435718
Human Recombinant Protein Products for PIWIL3:
Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005737 | cytoplasm |
IEA | -- |
PIWIL3 for ontologies About GeneDecksing
PIWIL3 Antibody Products:
Assay Products for PIWIL3: |
Protein
Domains /
Families
for PIWIL3 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
PIWIL3 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q7Z3Z3ProtoNet protein and cluster: Q7Z3Z3 2 Blocks protein families: IPB003100 Argonaute and Dicer protein IPB003165 Stem cell self-renewal protein Piwi
UniProtKB/Swiss-Prot: PIWL3_HUMAN, Q7Z3Z3Similarity: Belongs to the argonaute family. Piwi subfamilySimilarity: Contains 1 PAZ domainSimilarity: Contains 1 Piwi domain |
Function
for PIWIL3 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Molecular Function:
UniProtKB/Swiss-Prot Summary: PIWL3_HUMAN, Q7Z3Z3Function: May play a role during spermatogenesis by repressing transposable elements and prevent their mobilization,which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression oftransposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern themethylation and subsequent repression of transposons. Directly binds piRNAs, a class of 24 to 30 nucleotide RNAs thatare generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequenceelements. Besides their function in transposable elements repression, piRNAs are probably involved in other processesduring meiosis such as translation regulation (By similarity) Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0003676 | nucleic acid binding |
-- | -- | | GO:0003723 | RNA binding |
IEA | -- |
PIWIL3 for ontologies About GeneDecksing
Animal Models:
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: PIWIL3 (NM_001008496) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PIWIL3 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PIWIL3 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PIWIL3 |
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Pathways & Interactions
for PIWIL3 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
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Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Dorso-ventral axis formation | |
Pathway sources
See GeneCards unified pathways
Show all pathways
1 
Kegg Pathway (Kegg details for PIWIL3):
PIWIL3 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PIWIL3
STRING Interaction
Network Preview (showing 3 interactants - click image to see more details)
3 Interacting proteins for PIWIL3 (Q7Z3Z33 ENSP000003300314) via UniProtKB, MINT, STRING, and/or I2DAbout this table
Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6): About this table
PIWIL3 for ontologies About GeneDecksing
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Drugs & Compounds
for PIWIL3 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for PIWIL3
Search CenterWatch for drugs/clinical trials and news about PIWIL3 / PIWL3
|
Transcripts
for PIWIL3 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for PIWIL3 gene (2 alternative transcripts): NM_001008496.3 NM_001255975.1 Unigene Cluster for PIWIL3: Piwi-like 3 (Drosophila) Hs.448343 [show with all ESTs]Unigene Representative Sequence: NR_0456484 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000332271(uc003abd.1 uc011ajx.1 uc010gut.1 uc011ajy.1)
ENST00000533313 ENST00000527701 ENST00000532537
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: PIWIL3 (NM_001008496) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PIWIL3 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PIWIL3 |
Additional cDNA sequence: AB079368.1 AK302409.1 AK315806.1 BC144693.1 BC144696.1 NR_045648.1 NR_045649.1 1 DOTS entry: DT.101966291 2 AceView cDNA sequences: H55093 AB079368
GeneLoc Exon Structure
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Expression
for PIWIL3 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| PIWIL3 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TATTATAATT
About this image
See PIWIL3 Protein Expression from SPIRE MOPED and PaxDB
SOURCE GeneReport for Unigene cluster: Hs.448343
UniProtKB/Swiss-Prot: PIWL3_HUMAN, Q7Z3Z3Tissue specificity: Expressed in testis
SABiosciences Custom PCR Arrays for PIWIL3
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PIWIL3
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat PIWIL3 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PIWIL3 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PIWIL3 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PIWIL3 |
Orthologs
for PIWIL3 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for PIWIL3 gene from 3/12 species (see all 12) About this table
ENSEMBL Gene Tree for PIWIL3 (if available)
TreeFam Gene Tree for PIWIL3 (if available) |
Paralogs
for PIWIL3 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for PIWIL3 gene
- PIWIL42 PIWIL22 AGO32 AGO12 PIWIL12 AGO42 AGO22
3 SIMAP similar genes for PIWIL3 using alignment to 2 protein entries: PIWL3_HUMAN (see all proteins):PIWIL1 PIWIL4 PIWIL2
PIWIL3 for paralogs About GeneDecksing
|
Genomic Variants
for PIWIL3 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 22 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for PIWIL3 (25115001 - 25170687 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for PIWIL3
1 CNV: 103143
Human Gene Mutation Database (HGMD): PIWIL3
| SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PIWIL3 |
|
Disorders
/ Diseases
for PIWIL3 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
PIWIL3 for disorders About GeneDecksing
OMIM gene information: 610314
OMIM disorders: --
1  disease for PIWIL3: About MalaCardsspermatogenic failure
Human Genome Epidemiology (HuGE) Navigator: PIWIL3 (1 document)
Export disorders for PIWIL3 gene to outside databases
|
Publications
for PIWIL3 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for PIWIL3 gene integrated from 9 sources:
(articles sorted by number of sources associating them with PIWIL3) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Identification of eight members of the Argonaute family in the human genome. (PubMed id 12906857)1, 2, 3 Sasaki T.... Shimizu N. (2003)
- Genetic variants in Piwi-interacting RNA pathway gene s confer susceptibility to spermatogenic failure in a Chinese population. (PubMed id 20940137)1 Gu A....Wang X. (2010)
- [Preparation and distribution of polyclonal antibodie s against human PIWIL3 protein in tumor tissues] (PubMed id 18616918)1 Wang X.L....Huang Z.G. (2008)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
- The DNA sequence of human chromosome 22. (PubMed id 10591208)2 Dunham I....O'Brien K.P. (1999)
|
External Searches for PIWIL3 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing PIWIL3 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing PIWIL3 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PIWIL3 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for PIWIL3 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for PIWIL3 gene:
Search GeneIP for patents involving PIWIL3
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for PIWIL3 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
 | |
 | |
 |
| | |  | OriGene Antibodies for PIWIL3 | | OriGene shRNA RFP for PIWIL3 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PIWIL3 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PIWIL3 | | | OriGene Protein Over-expression Lysate for PIWIL3 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for PIWIL3 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PIWIL3 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for PIWIL3 | | OriGene Custom Protein Services for PIWIL3 | | | OriGene Custom Immunoassay Development | | |
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 | | | PIWIL3 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PIWIL3 |
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| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PIWIL3 |
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