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Aliases for PIR62804 Gene

Subcategory (RNA class) for PIR62804 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR62804 Gene

No Aliases found

ORGUL Members for PIR62804 Gene

Previous GeneCards Identifiers for PIR62804 Gene

  • GC10M034920

No data available for External Ids for PIR62804 Gene

Summaries for PIR62804 Gene

GeneCards Summary for PIR62804 Gene

PIR62804 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62804 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62804 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62804 Gene

Genomics for PIR62804 Gene

Regulatory Elements for PIR62804 Gene

Enhancers for PIR62804 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H068091 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13226 4.6 TBP NFIB JUN MAX RFX5 ZKSCAN1 GTF3C2 E2F1 CTBP1 ZNF316 CCAR1 DDX50 SIRT1 HNRNPH3 HERC4 ATOH7 ENSG00000233590 PBLD RPL12P8 DDX21
GH10H068082 0.9 ENCODE dbSUPER 0.7 -2.8 -2820 2.5 CTCF ZNF654 RNF2 MAX NR3C1 RAD21 RFX5 ZNF143 SMC3 SIRT1 MYPN ATOH7 ENSG00000233590 HNRNPH3 PBLD PIR62804
GH10H068096 1.4 Ensembl ENCODE dbSUPER 0.4 -16.9 -16850 2.3 TBP INSM2 RFX5 ZNF138 ZNF366 RCOR1 FOS SMARCC1 CEBPB ZEB2 HERC4 ATOH7 ENSG00000233590 HNRNPH3 PBLD MYPN SIRT1 PIR62804
GH10H068085 1.3 Ensembl ENCODE dbSUPER 0.4 -6.7 -6661 4.7 GTF2F1 TBP FOXA2 JUN CEBPG ZFHX2 CTBP1 GATA3 POLR2A SCRT2 ATOH7 SIRT1 ENSG00000233590 PIR62804 MYPN
GH10H068099 0.6 ENCODE dbSUPER 0.4 -19.2 -19202 1.7 PRDM10 ATOH7 HERC4 ENSG00000233590 MYPN PIR62804
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR62804 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62804 Gene

Genomic Locations for PIR62804 Gene
chr10:68,080,867-68,080,893
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr10:34,920,312-34,920,338
(GRCh37/hg19)

Genomic View for PIR62804 Gene

Genes around PIR62804 on UCSC Golden Path with GeneCards custom track

PIR62804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62804 Gene

Proteins for PIR62804 Gene

Post-translational modifications for PIR62804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62804 Gene

Domains & Families for PIR62804 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62804 Gene

Function for PIR62804 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62804 Gene

Localization for PIR62804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62804 Gene

Pathways & Interactions for PIR62804 Gene

SuperPathways for PIR62804 Gene

No Data Available

Interacting Proteins for PIR62804 Gene

Gene Ontology (GO) - Biological Process for PIR62804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62804 Gene

Drugs & Compounds for PIR62804 Gene

No Compound Related Data Available

Transcripts for PIR62804 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62804 Gene

No ASD Table

Relevant External Links for PIR62804 Gene

GeneLoc Exon Structure for
PIR62804

No data available for mRNA/cDNA for PIR62804 Gene

Expression for PIR62804 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62804 Gene

Orthologs for PIR62804 Gene

No data available for Orthologs and Evolution for PIR62804 Gene

Paralogs for PIR62804 Gene

No data available for Paralogs for PIR62804 Gene

Variants for PIR62804 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR62804 Gene

Disorders for PIR62804 Gene

No disorders were found for PIR62804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62804 Gene

Publications for PIR62804 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR62804 Gene

Sources for PIR62804 Gene

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