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Aliases for PIR62804 Gene

Subcategory (RNA class) for PIR62804 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR62804 Gene

No Aliases found

ORGUL Members for PIR62804 Gene

Previous GeneCards Identifiers for PIR62804 Gene

  • GC10M034920

No data available for External Ids for PIR62804 Gene

Summaries for PIR62804 Gene

GeneCards Summary for PIR62804 Gene

PIR62804 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62804 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62804 Gene

Genomics for PIR62804 Gene

Regulatory Elements for PIR62804 Gene

Enhancers for PIR62804 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G068082 1 ENCODE dbSUPER 0.7 -2.8 -2820 2.5 BCOR CTCF PTBP1 PKNOX1 ZMYM3 MAX RAD21 RFX5 ZNF664 ZFHX2 SIRT1 MYPN ATOH7 ENSG00000233590 HNRNPH3 PBLD PIR62804
GH10G068091 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13226 4.6 TBP NFIB SIN3A RFX5 GTF3C2 GATA2 RCOR1 FOS ZHX1 ZNF202 CCAR1 SIRT1 DDX50 ATOH7 ENSG00000233590 HNRNPH3 PBLD MIR1254-1 RPL12P8 DDX21
GH10G068096 1.4 Ensembl ENCODE dbSUPER 0.4 -16.9 -16850 2.3 ATF1 PKNOX1 SIN3A GATA2 FOS KDM4B JUNB MAFF PBX2 HMBOX1 HERC4 ATOH7 ENSG00000233590 HNRNPH3 PBLD MYPN SIRT1 PIR62804
GH10G068085 1.3 Ensembl ENCODE dbSUPER 0.4 -6.7 -6661 4.7 TBP PKNOX1 FOXA2 SCRT2 FOS EGR2 ZNF263 CEBPB ZNF217 MAFF ATOH7 SIRT1 ENSG00000233590 PIR62804 MYPN
GH10G068099 0.7 ENCODE dbSUPER 0.4 -19.2 -19202 1.7 CTCF PRDM10 ATOH7 HERC4 ENSG00000233590 MYPN PIR62804
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR62804 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR62804 Gene

Chromosome:
10
Start:
68,080,867 bp from pter
End:
68,080,893 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR62804 Gene

Genes around PIR62804 on UCSC Golden Path with GeneCards custom track

PIR62804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62804 Gene

Proteins for PIR62804 Gene

Post-translational modifications for PIR62804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62804 Gene

Domains & Families for PIR62804 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62804 Gene

Function for PIR62804 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62804 Gene

Localization for PIR62804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR62804 Gene

Pathways & Interactions for PIR62804 Gene

SuperPathways for PIR62804 Gene

No Data Available

Interacting Proteins for PIR62804 Gene

Gene Ontology (GO) - Biological Process for PIR62804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62804 Gene

Drugs & Compounds for PIR62804 Gene

No Compound Related Data Available

Transcripts for PIR62804 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62804 Gene

No ASD Table

Relevant External Links for PIR62804 Gene

GeneLoc Exon Structure for
PIR62804

No data available for mRNA/cDNA for PIR62804 Gene

Expression for PIR62804 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62804 Gene

Orthologs for PIR62804 Gene

No data available for Orthologs and Evolution for PIR62804 Gene

Paralogs for PIR62804 Gene

No data available for Paralogs for PIR62804 Gene

Variants for PIR62804 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR62804 Gene

Disorders for PIR62804 Gene

No disorders were found for PIR62804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62804 Gene

Publications for PIR62804 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR62804 Gene

Sources for PIR62804 Gene

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