Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR62366 Gene

Subcategory (RNA class) for PIR62366 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR62366 Gene

No Aliases found

ORGUL Members for PIR62366 Gene

No data available for External Ids for PIR62366 Gene

Summaries for PIR62366 Gene

GeneCards Summary for PIR62366 Gene

PIR62366 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62366 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62366 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62366 Gene

Genomics for PIR62366 Gene

Regulatory Elements for PIR62366 Gene

Enhancers for PIR62366 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H011812 1.2 Ensembl ENCODE 0.4 +12.1 12114 2.6 PKNOX1 ATF1 FOXA2 ARID4B SIN3A DMAP1 YY1 GATA2 ATF7 FOS USP47 PIR62366 MIR8070
GH11H011811 0.8 ENCODE 0.4 +14.6 14550 0.2 HDAC1 CTCF TBP PKNOX1 CHAMP1 FOSL1 CCNT2 EGR1 POLR2A ATF7 USP47 PIR62366 MIR8070
GH11H011798 0.8 ENCODE 0.3 +27.1 27110 0.2 GTF2F1 CTCF RB1 ZIC2 DNMT3B RAD21 RFX5 CC2D1A GATA2 SMC3 USP47 MIR8070 PIR62366
GH11H011787 0.7 ENCODE 0.3 +38.2 38170 0.2 GTF2F1 CTCF ZNF654 TEAD1 TRIM22 REST RAD21 ZNF592 RFX5 CTBP1 USP47 ENSG00000255351 CSNK2A3 MIR8070 PIR62366
GH11H011808 0.4 ENCODE 0.4 +16.9 16918 1 PKNOX1 ZIC2 USP47 PIR62366 MIR8070
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR62366 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62366 Gene

Genomic Locations for PIR62366 Gene
chr11:11,826,089-11,826,118
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr11:11,847,636-11,847,665
(GRCh37/hg19)

Genomic View for PIR62366 Gene

Genes around PIR62366 on UCSC Golden Path with GeneCards custom track

PIR62366 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62366 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62366 Gene

Proteins for PIR62366 Gene

Post-translational modifications for PIR62366 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62366 Gene

Domains & Families for PIR62366 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62366 Gene

Function for PIR62366 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62366 Gene

Localization for PIR62366 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62366 Gene

Pathways & Interactions for PIR62366 Gene

SuperPathways for PIR62366 Gene

No Data Available

Interacting Proteins for PIR62366 Gene

Gene Ontology (GO) - Biological Process for PIR62366 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62366 Gene

Drugs & Compounds for PIR62366 Gene

No Compound Related Data Available

Transcripts for PIR62366 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62366 Gene

No ASD Table

Relevant External Links for PIR62366 Gene

GeneLoc Exon Structure for
PIR62366

No data available for mRNA/cDNA for PIR62366 Gene

Expression for PIR62366 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62366 Gene

Orthologs for PIR62366 Gene

No data available for Orthologs and Evolution for PIR62366 Gene

Paralogs for PIR62366 Gene

No data available for Paralogs for PIR62366 Gene

Variants for PIR62366 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR62366 Gene

Disorders for PIR62366 Gene

No disorders were found for PIR62366 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62366 Gene

Publications for PIR62366 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR62366 Gene

Sources for PIR62366 Gene

Content
Loading form....