Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR61544 Gene

Subcategory (RNA class) for PIR61544 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR61544 Gene

No Aliases found

ORGUL Members for PIR61544 Gene

Previous GeneCards Identifiers for PIR61544 Gene

  • GC21M035284

No data available for External Ids for PIR61544 Gene

Summaries for PIR61544 Gene

GeneCards Summary for PIR61544 Gene

PIR61544 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR61544 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR61544 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR61544 Gene

Genomics for PIR61544 Gene

Regulatory Elements for PIR61544 Gene

Enhancers for PIR61544 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H033913 1.1 ENCODE 0.7 -3.0 -2998 2 PKNOX1 ARID4B SIN3A YY1 SLC30A9 ZNF766 ZNF207 ZNF143 SP3 SP5 ATP5O OLIG2 SON LINC00649 PIR61544
GH21H033901 0.7 ENCODE 0.4 +10.5 10483 0 CTCF ZNF654 L3MBTL2 MAX USF2 REST RAD21 CHAMP1 CC2D1A MITF LINC00649 ATP5O GC21P033897 PIR61544
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR61544 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR61544 Gene

Chromosome:
21
Start:
33,912,357 bp from pter
End:
33,912,384 bp from pter
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR61544 Gene

Genes around PIR61544 on UCSC Golden Path with GeneCards custom track

PIR61544 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR61544 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR61544 Gene

Proteins for PIR61544 Gene

Post-translational modifications for PIR61544 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR61544 Gene

Domains & Families for PIR61544 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR61544 Gene

Function for PIR61544 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR61544 Gene

Localization for PIR61544 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR61544 Gene

Pathways & Interactions for PIR61544 Gene

SuperPathways for PIR61544 Gene

No Data Available

Interacting Proteins for PIR61544 Gene

Gene Ontology (GO) - Biological Process for PIR61544 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR61544 Gene

Drugs & Compounds for PIR61544 Gene

No Compound Related Data Available

Transcripts for PIR61544 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR61544 Gene

No ASD Table

Relevant External Links for PIR61544 Gene

GeneLoc Exon Structure for
PIR61544

No data available for mRNA/cDNA for PIR61544 Gene

Expression for PIR61544 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR61544 Gene

Orthologs for PIR61544 Gene

No data available for Orthologs and Evolution for PIR61544 Gene

Paralogs for PIR61544 Gene

No data available for Paralogs for PIR61544 Gene

Variants for PIR61544 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR61544 Gene

Disorders for PIR61544 Gene

No disorders were found for PIR61544 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR61544 Gene

Publications for PIR61544 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR61544 Gene

Sources for PIR61544 Gene

Content
Loading form....