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PIR60651 Gene(RNA Gene)

 

GCID:
GC15M062211
GIFtS:
3
Genes Participants
UDN Logo

Aliases for PIR60651 Gene

Subcategory (RNA class) for PIR60651 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR60651 Gene

No Aliases found

ORGUL Members for PIR60651 Gene

Previous GeneCards Identifiers for PIR60651 Gene

  • GC15M062503

No data available for External Ids for PIR60651 Gene

Summaries for PIR60651 Gene

GeneCards Summary for PIR60651 Gene

PIR60651 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60651 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60651 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60651 Gene

Genomics for PIR60651 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for PIR60651 Gene

Promoters and enhancers for PIR60651 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH15I062211 Enhancer 0.6 ENCODE 550.8 +0.3 309 0.2 SOX5 SOX13 NFIA TEAD1 MLX TEAD3 SKI NFIL3 HNF1A CEBPA GC15M063820 GC15M063845 PIR54877 PIR31991 PIR49204 PIR49442 PIR59986 PIR53374 PIR60651 PIR53942
GH15I062208 Enhancer 0.4 ENCODE 550.8 +1.9 1879 2.7 ZNF680 CEBPA GC15M063817 GC15M063833 GC15M063845 GC15M063865 PIR54877 PIR31991 PIR55846 PIR49204 PIR49442 PIR34831
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR60651 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60651 Gene

Genomic Locations for PIR60651 Gene
chr15:62,211,760-62,211,786
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr15:62,503,959-62,503,985
(GRCh37/hg19)

Genomic View for PIR60651 Gene

Genes around PIR60651 on UCSC Golden Path with GeneCards custom track

PIR60651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60651 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60651 Gene

Proteins for PIR60651 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for PIR60651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60651 Gene

Domains & Families for PIR60651 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60651 Gene

Function for PIR60651 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60651 Gene

Localization for PIR60651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60651 Gene

Pathways & Interactions for PIR60651 Gene

SuperPathways for PIR60651 Gene

PathCards logo More details on SuperPathways for PIR60651
No Data Available

Interacting Proteins for PIR60651 Gene

Gene Ontology (GO) - Biological Process for PIR60651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60651 Gene

Drugs & Compounds for PIR60651 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for PIR60651 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60651 Gene

No ASD Table

Relevant External Links for PIR60651 Gene

GeneLoc Exon Structure for
PIR60651

No data available for mRNA/cDNA for PIR60651 Gene

Expression for PIR60651 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60651 Gene

Orthologs for PIR60651 Gene

No data available for Orthologs and Evolution for PIR60651 Gene

Paralogs for PIR60651 Gene

No data available for Paralogs for PIR60651 Gene

Variants for PIR60651 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60651 Gene

Disorders for PIR60651 Gene

No disorders were found for PIR60651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60651 Gene

Publications for PIR60651 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR60651 Gene

Sources for PIR60651 Gene

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