Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR60620 Gene

Subcategory (RNA class) for PIR60620 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR60620 Gene

No Aliases found

ORGUL Members for PIR60620 Gene

Previous GeneCards Identifiers for PIR60620 Gene

  • GC0XM153352

No data available for External Ids for PIR60620 Gene

Summaries for PIR60620 Gene

GeneCards Summary for PIR60620 Gene

PIR60620 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60620 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60620 Gene

Genomics for PIR60620 Gene

Regulatory Elements for PIR60620 Gene

Enhancers for PIR60620 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF154081 1 Ensembl ENCODE 0.8 +4.3 4271 3.2 MXI1 JUN MAX ZNF664 ZNF316 POLR3A FOS TCF7L2 BHLHE40 CEBPB TMEM187 PIR60620 IRAK1
GH0XF154090 0.8 ENCODE 0.8 -4.6 -4578 2.4 CTCF HDAC1 ESRRA ETV1 CBX5 NR2F6 CREM ZNF362 RFX1 DPF2 IRAK1 MIR718 PLXNA3 HCFC1 TMEM187 PIR60620 MECP2
GH0XF154122 1.6 FANTOM5 Ensembl ENCODE 0.3 -36.5 -36533 4.4 PKNOX1 ATF1 ARNT FEZF1 ELK1 GATA2 ZNF202 NCOA1 SMARCB1 MBD2 HCFC1 SNORA56 TMEM187 SNORA70 PLXNA3 RENBP MECP2 ARHGAP4 IKBKG PIR60620
GH0XF154093 1 ENCODE 0.4 -8.9 -8900 4.8 PKNOX1 ZNF2 YY1 GLIS2 ELK1 FOS CEBPZ SP3 NFYC REST TMEM187 SNORA70 IRAK1 MIR718 SNORA56 PIR60620 MECP2
GH0XF154073 1 Ensembl ENCODE 0.4 +12.9 12884 1.6 ATF1 HINFP TAL1 JUN CEBPG NCOR1 NFYB RCOR1 CREM ZNF362 TMEM187 PIR60620 IRAK1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR60620 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR60620 Gene

Chromosome:
X
Start:
154,087,442 bp from pter
End:
154,087,468 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR60620 Gene

Genes around PIR60620 on UCSC Golden Path with GeneCards custom track

PIR60620 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60620 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60620 Gene

Proteins for PIR60620 Gene

Post-translational modifications for PIR60620 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60620 Gene

Domains & Families for PIR60620 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60620 Gene

Function for PIR60620 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60620 Gene

Localization for PIR60620 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR60620 Gene

Pathways & Interactions for PIR60620 Gene

SuperPathways for PIR60620 Gene

No Data Available

Interacting Proteins for PIR60620 Gene

Gene Ontology (GO) - Biological Process for PIR60620 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60620 Gene

Transcripts for PIR60620 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60620 Gene

No ASD Table

Relevant External Links for PIR60620 Gene

GeneLoc Exon Structure for
PIR60620

No data available for mRNA/cDNA for PIR60620 Gene

Expression for PIR60620 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for PIR60620 Gene

Orthologs for PIR60620 Gene

No data available for Orthologs and Evolution for PIR60620 Gene

Paralogs for PIR60620 Gene

No data available for Paralogs for PIR60620 Gene

Variants for PIR60620 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR60620 Gene

Disorders for PIR60620 Gene

No disorders were found for PIR60620 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60620 Gene

Publications for PIR60620 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR60620 Gene

Sources for PIR60620 Gene

Content
Loading form....