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Aliases for PIR60584 Gene

Subcategory (RNA class) for PIR60584 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR60584 Gene

No Aliases found

ORGUL Members for PIR60584 Gene

No data available for External Ids for PIR60584 Gene

Summaries for PIR60584 Gene

GeneCards Summary for PIR60584 Gene

PIR60584 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60584 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR60584

Additional gene information for PIR60584 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60584 Gene

Genomics for PIR60584 Gene

GeneHancer (GH) Regulatory Elements for PIR60584 Gene

Promoters and enhancers for PIR60584 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I159899 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.8 -3.3 -3281 2.5 CTCF HDAC1 MEIS2 SIN3A BMI1 E2F1 CTBP1 GATA3 POLR2A VEZF1 CFAP45 MIR4259 ENSG00000272668 SNHG28 GC01P159904 PIR60584 GC01M159886
GH01I159907 Enhancer 0.2 ENCODE 0.8 +3.0 2975 0.2 VSIG8 SNHG28 IGSF9 ENSG00000212161 FCRL6 DUSP23 PIGM ENSG00000279430 GC01P159904 PIR60584
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR60584 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60584 Gene

Genomic Locations for PIR60584 Gene
chr1:159,904,171-159,904,201
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr1:159,873,961-159,873,991
(GRCh37/hg19)

Genomic View for PIR60584 Gene

Genes around PIR60584 on UCSC Golden Path with GeneCards custom track

PIR60584 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60584 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR60584 Gene

ORGUL Member Location for PIR60584 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60584 Gene

Proteins for PIR60584 Gene

Post-translational modifications for PIR60584 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60584 Gene

Domains & Families for PIR60584 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60584 Gene

Function for PIR60584 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60584 Gene

Localization for PIR60584 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60584 Gene

Pathways & Interactions for PIR60584 Gene

SuperPathways for PIR60584 Gene

No Data Available

Interacting Proteins for PIR60584 Gene

Gene Ontology (GO) - Biological Process for PIR60584 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60584 Gene

Drugs & Compounds for PIR60584 Gene

No Compound Related Data Available

Transcripts for PIR60584 Gene

fRNAdb Secondary structures for PIR60584 Gene

  • FR060735

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60584 Gene

No ASD Table

Relevant External Links for PIR60584 Gene

GeneLoc Exon Structure for
PIR60584

No data available for mRNA/cDNA for PIR60584 Gene

Expression for PIR60584 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60584 Gene

Orthologs for PIR60584 Gene

No data available for Orthologs and Evolution for PIR60584 Gene

Paralogs for PIR60584 Gene

No data available for Paralogs for PIR60584 Gene

Variants for PIR60584 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60584 Gene

Disorders for PIR60584 Gene

No disorders were found for PIR60584 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60584 Gene

Publications for PIR60584 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR60584 Gene

Sources for PIR60584 Gene

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