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Aliases for PIR60316 Gene

Subcategory (RNA class) for PIR60316 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR60316 Gene

No Aliases found

ORGUL Members for PIR60316 Gene

Previous GeneCards Identifiers for PIR60316 Gene

  • GC01M036008

No data available for External Ids for PIR60316 Gene

Summaries for PIR60316 Gene

GeneCards Summary for PIR60316 Gene

PIR60316 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60316 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60316 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60316 Gene

Genomics for PIR60316 Gene

Regulatory Elements for PIR60316 Gene

Enhancers for PIR60316 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H035537 1.3 Ensembl ENCODE dbSUPER 0.7 +3.3 3320 3 PKNOX1 ZNF133 BACH1 EBF1 ZIC2 ZNF121 ZNF316 POLR2A ZNF207 RUNX3 ENSG00000232335 CLSPN KIAA0319L PIR60316 LOC100419802
GH01H035544 1.1 ENCODE dbSUPER 0.7 -2.6 -2629 0 RB1 NFIB ARID4B RAD21 ZNF143 ZNF654 CEBPB USF2 REST NR2F2 PIR60316 NCDN
GH01H035553 1.7 Ensembl ENCODE dbSUPER 0.4 -14.3 -14340 6 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 ZMYM4 ZMYM6 SFPQ AGO3 ZMYM1 LOC653160 THRAP3 LOC100419802 ENSG00000232335 RPL12P45
GH01H035524 0.5 ENCODE 0.4 +18.2 18192 0 SMARCE1 ZNF274 DPF2 TCF7L2 ZMYM1 SFPQ ENSG00000230163 THRAP3 ZMYM6 LOC105378647 KIAA0319L LOC100419802 PIR60316
GH01H035532 0.4 dbSUPER 0.4 +9.6 9605 0 GATA3 NCDN KIAA0319L ENSG00000232335 CLSPN PIR60316 LOC100419802
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR60316 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR60316 Gene

Chromosome:
1
Start:
35,542,500 bp from pter
End:
35,542,526 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR60316 Gene

Genes around PIR60316 on UCSC Golden Path with GeneCards custom track

PIR60316 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60316 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60316 Gene

Proteins for PIR60316 Gene

Post-translational modifications for PIR60316 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60316 Gene

Domains & Families for PIR60316 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60316 Gene

Function for PIR60316 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60316 Gene

Localization for PIR60316 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60316 Gene

Pathways & Interactions for PIR60316 Gene

SuperPathways for PIR60316 Gene

No Data Available

Interacting Proteins for PIR60316 Gene

Gene Ontology (GO) - Biological Process for PIR60316 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60316 Gene

Drugs & Compounds for PIR60316 Gene

No Compound Related Data Available

Transcripts for PIR60316 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60316 Gene

No ASD Table

Relevant External Links for PIR60316 Gene

GeneLoc Exon Structure for
PIR60316

No data available for mRNA/cDNA for PIR60316 Gene

Expression for PIR60316 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60316 Gene

Orthologs for PIR60316 Gene

No data available for Orthologs and Evolution for PIR60316 Gene

Paralogs for PIR60316 Gene

No data available for Paralogs for PIR60316 Gene

Variants for PIR60316 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR60316 Gene

Disorders for PIR60316 Gene

No disorders were found for PIR60316 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60316 Gene

Publications for PIR60316 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR60316 Gene

Sources for PIR60316 Gene

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