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Aliases for PIR59405 Gene

Subcategory (RNA class) for PIR59405 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59405 Gene

No Aliases found

ORGUL Members for PIR59405 Gene

Previous GeneCards Identifiers for PIR59405 Gene

  • GC02P234371
  • GC02P234373

No data available for External Ids for PIR59405 Gene

Summaries for PIR59405 Gene

GeneCards Summary for PIR59405 Gene

PIR59405 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59405 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59405 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59405 Gene

Genomics for PIR59405 Gene

GeneHancer (GH) Regulatory Elements for PIR59405 Gene

Promoters and enhancers for PIR59405 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I233460 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.8 1771 1.3 SOX13 TFAP4 FOXA2 ZNF384 THRB RARA GATAD1 GATAD2A SOX5 TFE3 PIR59405 USP40 DGKD SAG LOC100422710
GH02I233456 Enhancer 0.2 dbSUPER 550.8 -1.6 -1565 1.6 PIR59405 ENSG00000201013 GC02M233380 DGKD
GH02I233412 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -37.4 -37446 18.4 PKNOX1 CLOCK FOXA2 ARNT SIN3A FOS KLF13 REST ZNF592 SMARCA4 USP40 SAG ATG16L1 DGKD SCARNA6 SCARNA5 INPP5D LOC105373929 PIR59405 GC02M233380
GH02I233448 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.4 -10.5 -10480 0.3 CTCF SP1 NFYC RAD21 ATG16L1 SCARNA5 PIR59405 ENSG00000201013 GC02M233380 DGKD
GH02I233443 Enhancer 0.9 ENCODE dbSUPER 0.4 -15.1 -15133 1.9 CTCF PKNOX1 MXI1 SAP130 ARID4B MAX SIN3A RAD21 CC2D1A ARID2 SCARNA5 ATG16L1 DGKD PIR59405 ENSG00000201013 GC02M233380
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59405 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59405 Gene

Genomic Locations for PIR59405 Gene
chr2:233,459,219-233,459,246
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr2:234,367,865-234,367,892
(GRCh37/hg19)

Genomic View for PIR59405 Gene

Genes around PIR59405 on UCSC Golden Path with GeneCards custom track

PIR59405 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59405 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59405 Gene

Proteins for PIR59405 Gene

Post-translational modifications for PIR59405 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59405 Gene

Domains & Families for PIR59405 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59405 Gene

Function for PIR59405 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59405 Gene

Localization for PIR59405 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59405 Gene

Pathways & Interactions for PIR59405 Gene

SuperPathways for PIR59405 Gene

No Data Available

Interacting Proteins for PIR59405 Gene

Gene Ontology (GO) - Biological Process for PIR59405 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59405 Gene

Drugs & Compounds for PIR59405 Gene

No Compound Related Data Available

Transcripts for PIR59405 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59405 Gene

No ASD Table

Relevant External Links for PIR59405 Gene

GeneLoc Exon Structure for
PIR59405

No data available for mRNA/cDNA for PIR59405 Gene

Expression for PIR59405 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59405 Gene

Orthologs for PIR59405 Gene

No data available for Orthologs and Evolution for PIR59405 Gene

Paralogs for PIR59405 Gene

No data available for Paralogs for PIR59405 Gene

Variants for PIR59405 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59405 Gene

Disorders for PIR59405 Gene

No disorders were found for PIR59405 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59405 Gene

Publications for PIR59405 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59405 Gene

Sources for PIR59405 Gene

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