Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR59286 Gene

Subcategory (RNA class) for PIR59286 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR59286 Gene

No Aliases found

ORGUL Members for PIR59286 Gene

Previous GeneCards Identifiers for PIR59286 Gene

  • GC08P067030
  • GC08P067038
  • GC08P067052
  • GC08P066115
  • GC08P066120
  • GC08P066127
  • GC08P066132
  • GC08P066136
  • GC08P066140

No data available for External Ids for PIR59286 Gene

Summaries for PIR59286 Gene

GeneCards Summary for PIR59286 Gene

PIR59286 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59286 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59286

Additional gene information for PIR59286 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59286 Gene

Genomics for PIR59286 Gene

Regulatory Elements for PIR59286 Gene

Enhancers for PIR59286 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H066112 1.4 ENCODE dbSUPER 0.7 0.0 -9 3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 C8orf44 CSPP1 MCMDC2 ADHFE1 PIR37716 PIR59286 GC08P066144 GC08P066139
GH08H066118 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.7 10730 12 PKNOX1 FOXA2 ATF1 ZNF133 SIN3A FEZF1 YY1 TCF12 GATA2 ATF7 CRH PIR59286 GC08P066144 GC08P066139 GC08P066170
GH08H066131 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.9 18879 2 CEBPB CEBPG IRF9 ATF7 TRIM24 ZSCAN29 CREM RUNX3 CRH GC08P066144 PIR59286 GC08P066139 GC08P066170
GH08H066141 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.3 28303 2 CTCF ETV1 BACH1 RAD21 MEF2D CTBP1 CREB1 SPI1 TRY-GTA5-1 CRH RRS1 RRS1-AS1 ADHFE1 LINC00967 GC08P066144 GC08P066170 PIR59286 GC08P066139
GH08H066157 0.8 ENCODE dbSUPER 0.3 +43.8 43842 4 PKNOX1 ZSCAN4 FOXP2 RUNX3 CRH TRIM55 LINC00967 GC08P066170 GC08P066139 GC08P066144 PIR59286
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR59286 on UCSC Golden Path with GeneCards custom track

Promoters for PIR59286 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000225363 -388 2401 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9

Genomic Location for PIR59286 Gene

Chromosome:
8
Start:
66,114,188 bp from pter
End:
66,114,218 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR59286 Gene

Genes around PIR59286 on UCSC Golden Path with GeneCards custom track

PIR59286 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59286 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59286 Gene

ORGUL Member Location for PIR59286 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59286 Gene

Proteins for PIR59286 Gene

Post-translational modifications for PIR59286 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59286 Gene

Domains & Families for PIR59286 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59286 Gene

Function for PIR59286 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59286 Gene

Localization for PIR59286 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59286 Gene

Pathways & Interactions for PIR59286 Gene

SuperPathways for PIR59286 Gene

No Data Available

Interacting Proteins for PIR59286 Gene

Gene Ontology (GO) - Biological Process for PIR59286 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59286 Gene

Drugs & Compounds for PIR59286 Gene

No Compound Related Data Available

Transcripts for PIR59286 Gene

fRNAdb Secondary structures for PIR59286 Gene

  • FR073364

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59286 Gene

No ASD Table

Relevant External Links for PIR59286 Gene

GeneLoc Exon Structure for
PIR59286

No data available for mRNA/cDNA for PIR59286 Gene

Expression for PIR59286 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59286 Gene

Orthologs for PIR59286 Gene

No data available for Orthologs and Evolution for PIR59286 Gene

Paralogs for PIR59286 Gene

No data available for Paralogs for PIR59286 Gene

Variants for PIR59286 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR59286 Gene

Disorders for PIR59286 Gene

No disorders were found for PIR59286 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59286 Gene

Publications for PIR59286 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59286 Gene

Sources for PIR59286 Gene

Content
Loading form....