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Aliases for PIR58001 Gene

Subcategory (RNA class) for PIR58001 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR58001 Gene

No Aliases found

Previous GeneCards Identifiers for PIR58001 Gene

  • GC22M038165
  • GC22M039051
  • GC22M037370
  • GC22M037680
  • GC22M038668
  • GC22M039801
  • GC22M040531
  • GC22M040977
  • GC22M041367

No data available for External Ids for PIR58001 Gene

Summaries for PIR58001 Gene

GeneCards Summary for PIR58001 Gene

PIR58001 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58001 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR58001

Additional gene information for PIR58001 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58001 Gene

Genomics for PIR58001 Gene

GeneHancer (GH) Regulatory Elements for PIR58001 Gene

Promoters and enhancers for PIR58001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I037370 Enhancer 0.5 ENCODE 550.8 -1.1 -1061 1.5 GLIS2 RFX1 POLR2A ZNF366 BMI1 ENSG00000272694 GC22M042200 GC22M042221 GC22M042245 GC22M042253 GC22M042256 GC22M042257 GC22M042272 GC22M042276 GC22M042301
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58001 Gene

Genomic Locations for PIR58001 Gene
chr22:37,369,888-37,369,925
(GRCh38/hg38)
Size:
38 bases
Orientation:
Minus strand

Genomic View for PIR58001 Gene

Genes around PIR58001 on UCSC Golden Path with GeneCards custom track

PIR58001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR58001 Gene

ORGUL Member Location for PIR58001 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58001 Gene

Proteins for PIR58001 Gene

Post-translational modifications for PIR58001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58001 Gene

Domains & Families for PIR58001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58001 Gene

Function for PIR58001 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58001 Gene

Localization for PIR58001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58001 Gene

Pathways & Interactions for PIR58001 Gene

SuperPathways for PIR58001 Gene

No Data Available

Interacting Proteins for PIR58001 Gene

Gene Ontology (GO) - Biological Process for PIR58001 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58001 Gene

Drugs & Compounds for PIR58001 Gene

No Compound Related Data Available

Transcripts for PIR58001 Gene

fRNAdb Secondary structures for PIR58001 Gene

  • FR379176

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58001 Gene

No ASD Table

Relevant External Links for PIR58001 Gene

GeneLoc Exon Structure for
PIR58001

No data available for mRNA/cDNA for PIR58001 Gene

Expression for PIR58001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58001 Gene

Orthologs for PIR58001 Gene

No data available for Orthologs and Evolution for PIR58001 Gene

Paralogs for PIR58001 Gene

No data available for Paralogs for PIR58001 Gene

Variants for PIR58001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58001 Gene

Disorders for PIR58001 Gene

No disorders were found for PIR58001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58001 Gene

Publications for PIR58001 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58001 Gene

Sources for PIR58001 Gene

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