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Aliases for PIR57975 Gene

Subcategory (RNA class) for PIR57975 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR57975 Gene

No Aliases found

ORGUL Members for PIR57975 Gene

No data available for External Ids for PIR57975 Gene

Summaries for PIR57975 Gene

GeneCards Summary for PIR57975 Gene

PIR57975 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR57975 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR57975 Gene

Genomics for PIR57975 Gene

Regulatory Elements for PIR57975 Gene

Enhancers for PIR57975 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G000969 1.1 ENCODE dbSUPER 0.4 -9.5 -9532 3.4 HDAC1 AGO1 KLF17 ZBTB40 GLIS2 EGR1 EGR2 SP3 ZBTB11 GATAD2B DGKQ GC04P000975 PIR57975
GH04G000961 0.6 dbSUPER 0.7 -0.8 -813 2.3 HIC1 CTCF KLF1 ZFHX2 MAZ POLR2A AGO1 RBFOX2 SLC26A1 DGKQ PIR57975 GC04P000975
GH04G000973 1 ENCODE dbSUPER 0.4 -11.6 -11565 0.3 HDAC1 CTCF LEF1 ESRRA USF1 SUZ12 BACH1 RBBP5 POLR2A EZH2 DGKQ SLC26A1 GC04P000975 PIR57975
GH04G000962 0.5 dbSUPER 0.7 +0.6 619 0.5 KLF1 ZFHX2 POLR2A AGO1 RBFOX2 SLC26A1 PIR57975 GC04M000940 GC04M000939
GH04G000968 0.6 dbSUPER 0.4 -7.1 -7106 0.5 CTCF KLF1 AGO1 ZIC2 HIC1 GLIS2 SMARCA4 POLR2A MYNN DGKQ PIR57975 GC04P000975
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR57975 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR57975 Gene

Chromosome:
4
Start:
962,055 bp from pter
End:
962,083 bp from pter
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR57975 Gene

Genes around PIR57975 on UCSC Golden Path with GeneCards custom track

PIR57975 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR57975 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR57975 Gene

Proteins for PIR57975 Gene

Post-translational modifications for PIR57975 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR57975 Gene

Domains & Families for PIR57975 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR57975 Gene

Function for PIR57975 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR57975 Gene

Localization for PIR57975 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR57975 Gene

Pathways & Interactions for PIR57975 Gene

SuperPathways for PIR57975 Gene

No Data Available

Interacting Proteins for PIR57975 Gene

Gene Ontology (GO) - Biological Process for PIR57975 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR57975 Gene

Drugs & Compounds for PIR57975 Gene

No Compound Related Data Available

Transcripts for PIR57975 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR57975 Gene

No ASD Table

Relevant External Links for PIR57975 Gene

GeneLoc Exon Structure for
PIR57975

No data available for mRNA/cDNA for PIR57975 Gene

Expression for PIR57975 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR57975 Gene

Orthologs for PIR57975 Gene

No data available for Orthologs and Evolution for PIR57975 Gene

Paralogs for PIR57975 Gene

No data available for Paralogs for PIR57975 Gene

Variants for PIR57975 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR57975 Gene

Disorders for PIR57975 Gene

No disorders were found for PIR57975 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR57975 Gene

Publications for PIR57975 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR57975 Gene

Sources for PIR57975 Gene

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