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Aliases for PIR55237 Gene

Subcategory (RNA class) for PIR55237 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR55237 Gene

No Aliases found

ORGUL Members for PIR55237 Gene

Previous GeneCards Identifiers for PIR55237 Gene

  • GC01M030969
  • GC01M030970
  • GC01M030972

No data available for External Ids for PIR55237 Gene

Summaries for PIR55237 Gene

GeneCards Summary for PIR55237 Gene

PIR55237 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR55237 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR55237

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR55237 Gene

Genomics for PIR55237 Gene

Regulatory Elements for PIR55237 Gene

Enhancers for PIR55237 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G030965 0.7 ENCODE 0.7 +1.5 1473 1.6 SIN3A RAD21 ZEB1 FOSL1 ZNF316 ZNF366 FOS PAF1 BHLHE40 ZNF623 GC01M030976 PIR55237 SNORD103B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR55237 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR55237 Gene

Chromosome:
1
Start:
30,968,165 bp from pter
End:
30,968,195 bp from pter
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR55237 Gene

Genes around PIR55237 on UCSC Golden Path with GeneCards custom track

PIR55237 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR55237 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR55237 Gene

ORGUL Member Location for PIR55237 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR55237 Gene

Proteins for PIR55237 Gene

Post-translational modifications for PIR55237 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR55237 Gene

Domains & Families for PIR55237 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR55237 Gene

Function for PIR55237 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR55237 Gene

Localization for PIR55237 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR55237 Gene

Pathways & Interactions for PIR55237 Gene

SuperPathways for PIR55237 Gene

No Data Available

Interacting Proteins for PIR55237 Gene

Gene Ontology (GO) - Biological Process for PIR55237 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR55237 Gene

Drugs & Compounds for PIR55237 Gene

No Compound Related Data Available

Transcripts for PIR55237 Gene

fRNAdb Secondary structures for PIR55237 Gene

  • FR228545
  • FR236484

Alternative Splicing Database (ASD) splice patterns (SP) for PIR55237 Gene

No ASD Table

Relevant External Links for PIR55237 Gene

GeneLoc Exon Structure for
PIR55237

No data available for mRNA/cDNA for PIR55237 Gene

Expression for PIR55237 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR55237 Gene

Orthologs for PIR55237 Gene

No data available for Orthologs and Evolution for PIR55237 Gene

Paralogs for PIR55237 Gene

No data available for Paralogs for PIR55237 Gene

Variants for PIR55237 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR55237 Gene

Disorders for PIR55237 Gene

No disorders were found for PIR55237 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR55237 Gene

Publications for PIR55237 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR55237 Gene

Sources for PIR55237 Gene

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