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Aliases for PIR55136 Gene

Subcategory (RNA class) for PIR55136 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR55136 Gene

No Aliases found

ORGUL Members for PIR55136 Gene

Previous GeneCards Identifiers for PIR55136 Gene

  • GC19P042584

No data available for External Ids for PIR55136 Gene

Summaries for PIR55136 Gene

GeneCards Summary for PIR55136 Gene

PIR55136 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR55136 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR55136 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR55136 Gene

Genomics for PIR55136 Gene

Regulatory Elements for PIR55136 Gene

Enhancers for PIR55136 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H042074 1.1 ENCODE 0.7 -3.7 -3684 3 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF526 ZNF574 HNRNPUL1 CCDC97 MEGF8 TMEM145 LOC732229 GRIK5 PIR55136
GH19H042081 0.7 ENCODE 0.7 +1.8 1754 0 CTCF ZNF654 ZEB2 RAD21 ZNF324 ZSCAN21 ZNF664 MTA3 POLR2A ZSCAN16 PIR55136 LOC100505622
GH19H042110 1.5 Ensembl ENCODE dbSUPER 0.3 +33.7 33673 7 HDGF PKNOX1 ATF1 ZNF133 SIN3A ZNF2 GLIS2 ZNF143 FOS ATF7 POU2F2 CIC GSK3A PAFAH1B3 PRR19 MEGF8 DEDD2 ZNF526 ATP1A3 CNFN
GH19H042090 1.1 Ensembl ENCODE 0.4 +11.5 11521 2 CTCF KLF1 MAX KLF17 RAD21 HIC1 MTA3 CTBP1 ZBTB48 ZSCAN5C GRIK5 ATP1A3 PIR55136 LOC100505622
GH19H042120 1.4 Ensembl ENCODE dbSUPER 0.3 +42.1 42132 4 HDGF TBL1XR1 SIN3A BATF ZNF143 FOS ATF7 ETV6 RUNX3 IKZF2 POU2F2 GSK3A ZNF526 DEDD2 MEGF8 LOC100505622 PIR55136
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR55136 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR55136 Gene

Chromosome:
19
Start:
42,080,199 bp from pter
End:
42,080,227 bp from pter
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR55136 Gene

Genes around PIR55136 on UCSC Golden Path with GeneCards custom track

PIR55136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR55136 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR55136 Gene

Proteins for PIR55136 Gene

Post-translational modifications for PIR55136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR55136 Gene

Domains & Families for PIR55136 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR55136 Gene

Function for PIR55136 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR55136 Gene

Localization for PIR55136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR55136 Gene

Pathways & Interactions for PIR55136 Gene

SuperPathways for PIR55136 Gene

No Data Available

Interacting Proteins for PIR55136 Gene

Gene Ontology (GO) - Biological Process for PIR55136 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR55136 Gene

Drugs & Compounds for PIR55136 Gene

No Compound Related Data Available

Transcripts for PIR55136 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR55136 Gene

No ASD Table

Relevant External Links for PIR55136 Gene

GeneLoc Exon Structure for
PIR55136

No data available for mRNA/cDNA for PIR55136 Gene

Expression for PIR55136 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR55136 Gene

Orthologs for PIR55136 Gene

No data available for Orthologs and Evolution for PIR55136 Gene

Paralogs for PIR55136 Gene

No data available for Paralogs for PIR55136 Gene

Variants for PIR55136 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR55136 Gene

Disorders for PIR55136 Gene

No disorders were found for PIR55136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR55136 Gene

Publications for PIR55136 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR55136 Gene

Sources for PIR55136 Gene

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