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Aliases for PIR53453 Gene

Subcategory (RNA class) for PIR53453 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR53453 Gene

No Aliases found

Previous GeneCards Identifiers for PIR53453 Gene

  • GC12P009504
  • GC12P009603
  • GC12P009643
  • GC12P009355
  • GC12P009378
  • GC12P009391
  • GC12P009422
  • GC12P009443
  • GC12P009479

No data available for External Ids for PIR53453 Gene

Summaries for PIR53453 Gene

GeneCards Summary for PIR53453 Gene

PIR53453 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53453 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53453 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53453 Gene

Genomics for PIR53453 Gene

Regulatory Elements for PIR53453 Gene

Enhancers for PIR53453 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H009346 0.8 ENCODE 0.7 0.0 -20 1 ATF1 NFRKB ZNF766 ZBTB11 USF2 CEBPB HDAC8 MEF2D TFDP1 ZNF589 LOC642846 ENSG00000214776 LINC00612 LINC02367 GC12P009675 PIR53453 PIR49219
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR53453 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR53453 Gene

Chromosome:
12
Start:
9,347,402 bp from pter
End:
9,347,432 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR53453 Gene

Genes around PIR53453 on UCSC Golden Path with GeneCards custom track

PIR53453 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53453 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR53453 Gene

ORGUL Member Location for PIR53453 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53453 Gene

Proteins for PIR53453 Gene

Post-translational modifications for PIR53453 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53453 Gene

Domains & Families for PIR53453 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53453 Gene

Function for PIR53453 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53453 Gene

Localization for PIR53453 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53453 Gene

Pathways & Interactions for PIR53453 Gene

SuperPathways for PIR53453 Gene

No Data Available

Interacting Proteins for PIR53453 Gene

Gene Ontology (GO) - Biological Process for PIR53453 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR53453 Gene

Drugs & Compounds for PIR53453 Gene

No Compound Related Data Available

Transcripts for PIR53453 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53453 Gene

No ASD Table

Relevant External Links for PIR53453 Gene

GeneLoc Exon Structure for
PIR53453

No data available for mRNA/cDNA for PIR53453 Gene

Expression for PIR53453 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53453 Gene

Orthologs for PIR53453 Gene

No data available for Orthologs and Evolution for PIR53453 Gene

Paralogs for PIR53453 Gene

No data available for Paralogs for PIR53453 Gene

Variants for PIR53453 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR53453 Gene

Disorders for PIR53453 Gene

No disorders were found for PIR53453 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53453 Gene

Publications for PIR53453 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53453 Gene

Sources for PIR53453 Gene

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