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Aliases for PIR53170 Gene

Subcategory (RNA class) for PIR53170 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR53170 Gene

No Aliases found

ORGUL Members for PIR53170 Gene

Previous GeneCards Identifiers for PIR53170 Gene

  • GC01P144812

No data available for External Ids for PIR53170 Gene

Summaries for PIR53170 Gene

GeneCards Summary for PIR53170 Gene

PIR53170 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53170 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53170 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53170 Gene

Genomics for PIR53170 Gene

Regulatory Elements for PIR53170 Gene

Enhancers for PIR53170 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H033336 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.1 102 15 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 PHC2 S100PBP A3GALT2 RBBP4 BSDC1 ENSG00000225313 TRIM62 ZSCAN20 ENSG00000270115 ZBTB8OS
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR53170 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR53170 Gene

Chromosome:
1
Start:
33,343,811 bp from pter
End:
33,343,838 bp from pter
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR53170 Gene

Genes around PIR53170 on UCSC Golden Path with GeneCards custom track

PIR53170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53170 Gene

Proteins for PIR53170 Gene

Post-translational modifications for PIR53170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53170 Gene

Domains & Families for PIR53170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53170 Gene

Function for PIR53170 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53170 Gene

Localization for PIR53170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53170 Gene

Pathways & Interactions for PIR53170 Gene

SuperPathways for PIR53170 Gene

No Data Available

Interacting Proteins for PIR53170 Gene

Gene Ontology (GO) - Biological Process for PIR53170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR53170 Gene

Drugs & Compounds for PIR53170 Gene

No Compound Related Data Available

Transcripts for PIR53170 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53170 Gene

No ASD Table

Relevant External Links for PIR53170 Gene

GeneLoc Exon Structure for
PIR53170

No data available for mRNA/cDNA for PIR53170 Gene

Expression for PIR53170 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53170 Gene

Orthologs for PIR53170 Gene

No data available for Orthologs and Evolution for PIR53170 Gene

Paralogs for PIR53170 Gene

No data available for Paralogs for PIR53170 Gene

Variants for PIR53170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR53170 Gene

Disorders for PIR53170 Gene

No disorders were found for PIR53170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53170 Gene

Publications for PIR53170 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53170 Gene

Sources for PIR53170 Gene

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