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Aliases for PIR51874 Gene

Subcategory (RNA class) for PIR51874 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR51874 Gene

No Aliases found

ORGUL Members for PIR51874 Gene

Previous GeneCards Identifiers for PIR51874 Gene

  • GC22M018336

No data available for External Ids for PIR51874 Gene

Summaries for PIR51874 Gene

GeneCards Summary for PIR51874 Gene

PIR51874 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51874 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51874 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51874 Gene

Genomics for PIR51874 Gene

Regulatory Elements for PIR51874 Gene

Enhancers for PIR51874 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H017855 0.9 ENCODE dbSUPER 0.7 -4.3 -4287 4 MAX REST BATF RAD21 YY1 JUND HNF4G NR2C1 ZBTB33 HNF4A MICAL3 ENSG00000093100 PIR51874 GC22M017948 PIR41738
GH22H017851 0.9 ENCODE dbSUPER 0.7 +1.0 973 2 TAL1 MAX REST FOXA1 GABPA YY1 TCF12 JUND HNF4A PIR51874 GC22M017839
GH22H017845 1.4 Ensembl ENCODE dbSUPER 0.4 +7.3 7269 2 HDAC1 PKNOX1 FOXA2 ATF1 TBL1XR1 TCF12 GATA2 FOS RCOR1 ATF7 MICAL3 ENSG00000093100 ENSG00000225335 PEX26 ENSG00000236890 GC22M017839 PIR51874
GH22H017889 1.3 FANTOM5 ENCODE dbSUPER 0.3 -37.0 -36992 3 CTCF PKNOX1 RB1 REST RAD21 FOSL1 CTBP1 GATA3 ZBTB48 ZNF341 MICAL3 PIR51874 GC22M017948 PIR41738
GH22H017867 0.9 ENCODE dbSUPER 0.4 -16.0 -16041 6 PKNOX1 L3MBTL2 USF2 MNT RAD21 NFIC ZNF610 NFYB FOS NFE2 MICAL3 PIR51874 GC22M017948 PIR41738
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR51874 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR51874 Gene

Chromosome:
22
Start:
17,853,881 bp from pter
End:
17,853,907 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR51874 Gene

Genes around PIR51874 on UCSC Golden Path with GeneCards custom track

PIR51874 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51874 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51874 Gene

Proteins for PIR51874 Gene

Post-translational modifications for PIR51874 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51874 Gene

Domains & Families for PIR51874 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51874 Gene

Function for PIR51874 Gene

Phenotypes From GWAS Catalog for PIR51874 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51874 Gene

Localization for PIR51874 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51874 Gene

Pathways & Interactions for PIR51874 Gene

SuperPathways for PIR51874 Gene

No Data Available

Interacting Proteins for PIR51874 Gene

Gene Ontology (GO) - Biological Process for PIR51874 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51874 Gene

Drugs & Compounds for PIR51874 Gene

No Compound Related Data Available

Transcripts for PIR51874 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51874 Gene

No ASD Table

Relevant External Links for PIR51874 Gene

GeneLoc Exon Structure for
PIR51874

No data available for mRNA/cDNA for PIR51874 Gene

Expression for PIR51874 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51874 Gene

Orthologs for PIR51874 Gene

No data available for Orthologs and Evolution for PIR51874 Gene

Paralogs for PIR51874 Gene

No data available for Paralogs for PIR51874 Gene

Variants for PIR51874 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR51874 Gene

Disorders for PIR51874 Gene

No disorders were found for PIR51874 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51874 Gene

Publications for PIR51874 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR51874 Gene

Sources for PIR51874 Gene

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