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Aliases for PIR50478 Gene

Subcategory (RNA class) for PIR50478 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR50478 Gene

No Aliases found

Previous GeneCards Identifiers for PIR50478 Gene

  • GC09P113119
  • GC09P113239
  • GC09P113366
  • GC09P113504
  • GC09P113627
  • GC09P113741

No data available for External Ids for PIR50478 Gene

Summaries for PIR50478 Gene

GeneCards Summary for PIR50478 Gene

PIR50478 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50478 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR50478

Additional gene information for PIR50478 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50478 Gene

Genomics for PIR50478 Gene

Genomic Location for PIR50478 Gene

Chromosome:
9
Start:
113,118,025 bp from pter
End:
113,118,082 bp from pter
Size:
58 bases
Orientation:
Plus strand

Genomic View for PIR50478 Gene

Genes around PIR50478 on UCSC Golden Path with GeneCards custom track

PIR50478 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50478 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR50478 Gene

ORGUL Member Location for PIR50478 gene

No data available for Regulatory Elements , Cytogenetic band and RefSeq DNA sequence for PIR50478 Gene

Proteins for PIR50478 Gene

Post-translational modifications for PIR50478 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50478 Gene

Domains & Families for PIR50478 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50478 Gene

Function for PIR50478 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50478 Gene

Localization for PIR50478 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50478 Gene

Pathways & Interactions for PIR50478 Gene

SuperPathways for PIR50478 Gene

No Data Available

Interacting Proteins for PIR50478 Gene

Gene Ontology (GO) - Biological Process for PIR50478 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50478 Gene

Drugs & Compounds for PIR50478 Gene

No Compound Related Data Available

Transcripts for PIR50478 Gene

fRNAdb Secondary structures for PIR50478 Gene

  • FR361714
  • FR232931
  • FR399026
  • FR077569
  • FR322174

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50478 Gene

No ASD Table

Relevant External Links for PIR50478 Gene

GeneLoc Exon Structure for
PIR50478

No data available for mRNA/cDNA for PIR50478 Gene

Expression for PIR50478 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50478 Gene

Orthologs for PIR50478 Gene

No data available for Orthologs and Evolution for PIR50478 Gene

Paralogs for PIR50478 Gene

No data available for Paralogs for PIR50478 Gene

Variants for PIR50478 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR50478 Gene

Disorders for PIR50478 Gene

No disorders were found for PIR50478 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50478 Gene

Publications for PIR50478 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR50478 Gene

Sources for PIR50478 Gene

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