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Aliases for PIR50368 Gene

Subcategory (RNA class) for PIR50368 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR50368 Gene

No Aliases found

ORGUL Members for PIR50368 Gene

Previous GeneCards Identifiers for PIR50368 Gene

  • GC10M071874

No data available for External Ids for PIR50368 Gene

Summaries for PIR50368 Gene

GeneCards Summary for PIR50368 Gene

PIR50368 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50368 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50368 Gene

Genomics for PIR50368 Gene

Regulatory Elements for PIR50368 Gene

Enhancers for PIR50368 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G070130 1.3 ENCODE dbSUPER 0.4 -17.6 -17641 3.4 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 FOS PPA1 SAR1A AIFM2 PIR50368
GH10G070116 0.7 ENCODE 0.7 -2.1 -2075 0.2 HDGF CTCF TFAP4 ZIC2 ZNF2 RAD21 RFX5 ZNF143 ZNF207 SMC3 TYSND1 CALM2P2 SAR1A PIR50368 AIFM2
GH10G070117 0.7 ENCODE 0.7 -2.3 -2275 0.2 HDGF CTCF TFAP4 ZIC2 ZNF2 RAD21 RFX5 ZNF143 ZNF207 SMC3 TYSND1 CALM2P2 SAR1A PIR50368 AIFM2
GH10G070123 1 dbSUPER 0.4 -9.5 -9496 1.1 HDGF ARNT CREB3L1 TCF12 ZNF766 GATA2 REST ZNF592 MEF2D CREB3 TYSND1 CALM2P2 SAR1A NPFFR1 AIFM2 PIR50368
GH10G070108 1 ENCODE 0.4 +5.8 5834 0.2 HDGF ATF1 SIN3A YY1 FOS KLF13 CAVIN1 REST MEF2D CREB3 TYSND1 CALM2P2 SAR1A PIR50368 PIR45222
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR50368 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR50368 Gene

Chromosome:
10
Start:
70,114,279 bp from pter
End:
70,114,305 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR50368 Gene

Genes around PIR50368 on UCSC Golden Path with GeneCards custom track

PIR50368 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50368 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50368 Gene

Proteins for PIR50368 Gene

Post-translational modifications for PIR50368 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50368 Gene

Domains & Families for PIR50368 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50368 Gene

Function for PIR50368 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50368 Gene

Localization for PIR50368 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR50368 Gene

Pathways & Interactions for PIR50368 Gene

SuperPathways for PIR50368 Gene

No Data Available

Interacting Proteins for PIR50368 Gene

Gene Ontology (GO) - Biological Process for PIR50368 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50368 Gene

Drugs & Compounds for PIR50368 Gene

No Compound Related Data Available

Transcripts for PIR50368 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50368 Gene

No ASD Table

Relevant External Links for PIR50368 Gene

GeneLoc Exon Structure for
PIR50368

No data available for mRNA/cDNA for PIR50368 Gene

Expression for PIR50368 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50368 Gene

Orthologs for PIR50368 Gene

No data available for Orthologs and Evolution for PIR50368 Gene

Paralogs for PIR50368 Gene

No data available for Paralogs for PIR50368 Gene

Variants for PIR50368 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR50368 Gene

Disorders for PIR50368 Gene

No disorders were found for PIR50368 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50368 Gene

Publications for PIR50368 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR50368 Gene

Sources for PIR50368 Gene

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