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Aliases for PIR49782 Gene

Subcategory (RNA class) for PIR49782 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR49782 Gene

No Aliases found

ORGUL Members for PIR49782 Gene

No data available for External Ids for PIR49782 Gene

Summaries for PIR49782 Gene

GeneCards Summary for PIR49782 Gene

PIR49782 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49782 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49782 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49782 Gene

Genomics for PIR49782 Gene

Regulatory Elements for PIR49782 Gene

Enhancers for PIR49782 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H028499 0.8 ENCODE dbSUPER 0.7 +2.6 2647 0 SREBF1 CTBP1 ESRRA CREB1 ATF7 ATF2 PIR49782 GC16P028499 IL27
GH16H028503 1.3 Ensembl ENCODE 0.4 +8.7 8706 4 HDGF MLX ARID4B DMAP1 SLC30A9 ZNF143 ZNF207 ATF7 RUNX3 SP5 TUFM SULT1A2 CDC37P1 GC16P028499 PIR49782 IL27
GH16H028524 0.7 ENCODE 0.3 +27.4 27412 0 SMARCA5 CTCF STAT1 TAF1 REST RAD21 YY1 MEF2D ZNF766 JUND SULT1A2 CLN3 APOBR ENSG00000251417 IL27 PIR49782 GC16P028499
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR49782 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR49782 Gene

Chromosome:
16
Start:
28,497,408 bp from pter
End:
28,497,438 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR49782 Gene

Genes around PIR49782 on UCSC Golden Path with GeneCards custom track

PIR49782 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49782 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR49782 Gene

ORGUL Member Location for PIR49782 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49782 Gene

Proteins for PIR49782 Gene

Post-translational modifications for PIR49782 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49782 Gene

Domains & Families for PIR49782 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49782 Gene

Function for PIR49782 Gene

Phenotypes From GWAS Catalog for PIR49782 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49782 Gene

Localization for PIR49782 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49782 Gene

Pathways & Interactions for PIR49782 Gene

SuperPathways for PIR49782 Gene

No Data Available

Interacting Proteins for PIR49782 Gene

Gene Ontology (GO) - Biological Process for PIR49782 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49782 Gene

Drugs & Compounds for PIR49782 Gene

No Compound Related Data Available

Transcripts for PIR49782 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49782 Gene

No ASD Table

Relevant External Links for PIR49782 Gene

GeneLoc Exon Structure for
PIR49782

No data available for mRNA/cDNA for PIR49782 Gene

Expression for PIR49782 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49782 Gene

Orthologs for PIR49782 Gene

No data available for Orthologs and Evolution for PIR49782 Gene

Paralogs for PIR49782 Gene

No data available for Paralogs for PIR49782 Gene

Variants for PIR49782 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR49782 Gene

Disorders for PIR49782 Gene

No disorders were found for PIR49782 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49782 Gene

Publications for PIR49782 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49782 Gene

Sources for PIR49782 Gene

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