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Aliases for PIR49571 Gene

Subcategory (RNA class) for PIR49571 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49571 Gene

No Aliases found

ORGUL Members for PIR49571 Gene

Previous GeneCards Identifiers for PIR49571 Gene

  • GC01P016723

No data available for External Ids for PIR49571 Gene

Summaries for PIR49571 Gene

GeneCards Summary for PIR49571 Gene

PIR49571 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49571 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49571 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49571 Gene

Genomics for PIR49571 Gene

Regulatory Elements for PIR49571 Gene

Enhancers for PIR49571 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H032980 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.2 158 3 HDGF PKNOX1 ATF1 FOXA2 ARNT SIN3A ZNF766 ZNF207 ATF7 RUNX3 RNF19B FNDC5 ENSG00000239670 GC01P032982 PIR49571 LOC100419257
GH01H032983 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.1 3054 1 RFX1 BMI1 RELA GATA2 IKZF1 RCOR1 RUNX3 IKZF2 SPI1 RNF19B ENSG00000239670 GC01P032982 PIR49571 LOC100419257
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR49571 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR49571 Gene

Chromosome:
1
Start:
32,981,581 bp from pter
End:
32,981,611 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR49571 Gene

Genes around PIR49571 on UCSC Golden Path with GeneCards custom track

PIR49571 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49571 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49571 Gene

Proteins for PIR49571 Gene

Post-translational modifications for PIR49571 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49571 Gene

Domains & Families for PIR49571 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49571 Gene

Function for PIR49571 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49571 Gene

Localization for PIR49571 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49571 Gene

Pathways & Interactions for PIR49571 Gene

SuperPathways for PIR49571 Gene

No Data Available

Interacting Proteins for PIR49571 Gene

Gene Ontology (GO) - Biological Process for PIR49571 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49571 Gene

Drugs & Compounds for PIR49571 Gene

No Compound Related Data Available

Transcripts for PIR49571 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49571 Gene

No ASD Table

Relevant External Links for PIR49571 Gene

GeneLoc Exon Structure for
PIR49571

No data available for mRNA/cDNA for PIR49571 Gene

Expression for PIR49571 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49571 Gene

Orthologs for PIR49571 Gene

No data available for Orthologs and Evolution for PIR49571 Gene

Paralogs for PIR49571 Gene

No data available for Paralogs for PIR49571 Gene

Variants for PIR49571 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR49571 Gene

Disorders for PIR49571 Gene

No disorders were found for PIR49571 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49571 Gene

Publications for PIR49571 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR49571 Gene

Sources for PIR49571 Gene

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