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Aliases for PIR49071 Gene

Subcategory (RNA class) for PIR49071 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR49071 Gene

No Aliases found

ORGUL Members for PIR49071 Gene

Previous GeneCards Identifiers for PIR49071 Gene

  • GC21P045653

No data available for External Ids for PIR49071 Gene

Summaries for PIR49071 Gene

GeneCards Summary for PIR49071 Gene

PIR49071 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49071 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49071 Gene

Genomics for PIR49071 Gene

Regulatory Elements for PIR49071 Gene

Enhancers for PIR49071 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21G044237 0.8 ENCODE 0.7 +3.5 3534 0.2 PKNOX1 JUN ZBTB40 CTBP1 POLR2A ZSCAN5C PATZ1 FOS RCOR1 RFX1 DNMT3L PIR49071 ICOSLG
GH21G044217 1.1 ENCODE dbSUPER 0.4 -15.3 -15290 1.2 HDAC1 PKNOX1 ATF1 GLI4 ZNF766 RELB ETV6 IKZF2 KLF13 CREM C21orf33 PWP2 ICOSLG LOC105372832 PIR49071
GH21G044215 1.1 ENCODE dbSUPER 0.4 -18.5 -18492 0.6 HDGF PKNOX1 ZNF473 NFRKB INSM2 YBX1 ZNF766 ZNF354C ZNF207 ETV6 ICOSLG LOC105372832 PIR49071
GH21G044223 1.1 Ensembl ENCODE 0.4 -10.3 -10342 1.0 RB1 SIN3A ZNF121 ELK1 ZNF143 SP3 GATAD2B MBD2 SP1 MAFF C21orf33 PWP2 ICOSLG TRPM2-AS PICSAR PIR49071 LOC105372832
GH21G044221 1 ENCODE dbSUPER 0.4 -13.0 -13037 0.2 CTCF BACH1 ZIC2 PATZ1 PRDM10 KLF8 ZBTB20 MAZ BHLHE40 CBFB C21orf33 PWP2 ICOSLG PIR49071 LOC105372832
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR49071 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR49071 Gene

Chromosome:
21
Start:
44,233,869 bp from pter
End:
44,233,896 bp from pter
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR49071 Gene

Genes around PIR49071 on UCSC Golden Path with GeneCards custom track

PIR49071 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49071 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49071 Gene

Proteins for PIR49071 Gene

Post-translational modifications for PIR49071 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49071 Gene

Domains & Families for PIR49071 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49071 Gene

Function for PIR49071 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49071 Gene

Localization for PIR49071 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR49071 Gene

Pathways & Interactions for PIR49071 Gene

SuperPathways for PIR49071 Gene

No Data Available

Interacting Proteins for PIR49071 Gene

Gene Ontology (GO) - Biological Process for PIR49071 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49071 Gene

Drugs & Compounds for PIR49071 Gene

No Compound Related Data Available

Transcripts for PIR49071 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49071 Gene

No ASD Table

Relevant External Links for PIR49071 Gene

GeneLoc Exon Structure for
PIR49071

No data available for mRNA/cDNA for PIR49071 Gene

Expression for PIR49071 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49071 Gene

Orthologs for PIR49071 Gene

No data available for Orthologs and Evolution for PIR49071 Gene

Paralogs for PIR49071 Gene

No data available for Paralogs for PIR49071 Gene

Variants for PIR49071 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR49071 Gene

Disorders for PIR49071 Gene

No disorders were found for PIR49071 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49071 Gene

Publications for PIR49071 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR49071 Gene

Sources for PIR49071 Gene

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