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Aliases for PIR48712 Gene

Subcategory (RNA class) for PIR48712 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR48712 Gene

No Aliases found

ORGUL Members for PIR48712 Gene

Previous GeneCards Identifiers for PIR48712 Gene

  • GC09P136892
  • GC09P136906
  • GC09P136913
  • GC09P134027

No data available for External Ids for PIR48712 Gene

Summaries for PIR48712 Gene

GeneCards Summary for PIR48712 Gene

PIR48712 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48712 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR48712

Additional gene information for PIR48712 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48712 Gene

Genomics for PIR48712 Gene

Regulatory Elements for PIR48712 Gene

Enhancers for PIR48712 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H134024 1 ENCODE 0.7 -1.2 -1233 2 HDGF PKNOX1 ARNT ARID4B SIN3A GLI4 ETS1 GLIS2 ZNF143 SP3 COL5A1 RPL7A BRD3OS MED22 SURF4 GTF3C5 BRD3 GC09P134039 PIR48712
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR48712 on UCSC Golden Path with GeneCards custom track

Promoters for PIR48712 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000242694 -1366 1601 HDGF PKNOX1 ARNT ARID4B SIN3A ETS1 SLC30A9 GLIS2 ZNF143 SP3

Genomic Location for PIR48712 Gene

Chromosome:
9
Start:
134,026,766 bp from pter
End:
134,026,798 bp from pter
Size:
33 bases
Orientation:
Plus strand

Genomic View for PIR48712 Gene

Genes around PIR48712 on UCSC Golden Path with GeneCards custom track

PIR48712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR48712 Gene

ORGUL Member Location for PIR48712 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48712 Gene

Proteins for PIR48712 Gene

Post-translational modifications for PIR48712 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48712 Gene

Domains & Families for PIR48712 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48712 Gene

Function for PIR48712 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48712 Gene

Localization for PIR48712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48712 Gene

Pathways & Interactions for PIR48712 Gene

SuperPathways for PIR48712 Gene

No Data Available

Interacting Proteins for PIR48712 Gene

Gene Ontology (GO) - Biological Process for PIR48712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48712 Gene

Drugs & Compounds for PIR48712 Gene

No Compound Related Data Available

Transcripts for PIR48712 Gene

fRNAdb Secondary structures for PIR48712 Gene

  • FR226352

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48712 Gene

No ASD Table

Relevant External Links for PIR48712 Gene

GeneLoc Exon Structure for
PIR48712

No data available for mRNA/cDNA for PIR48712 Gene

Expression for PIR48712 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48712 Gene

Orthologs for PIR48712 Gene

No data available for Orthologs and Evolution for PIR48712 Gene

Paralogs for PIR48712 Gene

No data available for Paralogs for PIR48712 Gene

Variants for PIR48712 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR48712 Gene

Disorders for PIR48712 Gene

No disorders were found for PIR48712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48712 Gene

Publications for PIR48712 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48712 Gene

Sources for PIR48712 Gene

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