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Aliases for PIR48640 Gene

Subcategory (RNA class) for PIR48640 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR48640 Gene

No Aliases found

ORGUL Members for PIR48640 Gene

Previous GeneCards Identifiers for PIR48640 Gene

  • GC10P072186
  • GC10P072192
  • GC10P072203
  • GC10P072208
  • GC10P072214

No data available for External Ids for PIR48640 Gene

Summaries for PIR48640 Gene

GeneCards Summary for PIR48640 Gene

PIR48640 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48640 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48640 Gene

Genomics for PIR48640 Gene

Regulatory Elements for PIR48640 Gene

Enhancers for PIR48640 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G070426 0.6 ENCODE 0.7 +1.2 1169 1.1 NRF1 MAX CEBPB YY1 NR2F2 GABPA ATF3 IKZF1 ZBTB33 EIF4EBP2 PIR48640 PIR51976
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR48640 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR48640 Gene

Chromosome:
10
Start:
70,426,085 bp from pter
End:
70,426,112 bp from pter
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR48640 Gene

Genes around PIR48640 on UCSC Golden Path with GeneCards custom track

PIR48640 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48640 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48640 Gene

Proteins for PIR48640 Gene

Post-translational modifications for PIR48640 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR48640 Gene

Domains & Families for PIR48640 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR48640 Gene

Function for PIR48640 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48640 Gene

Localization for PIR48640 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR48640 Gene

Pathways & Interactions for PIR48640 Gene

SuperPathways for PIR48640 Gene

No Data Available

Interacting Proteins for PIR48640 Gene

Gene Ontology (GO) - Biological Process for PIR48640 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48640 Gene

Drugs & Compounds for PIR48640 Gene

No Compound Related Data Available

Transcripts for PIR48640 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48640 Gene

No ASD Table

Relevant External Links for PIR48640 Gene

GeneLoc Exon Structure for
PIR48640

No data available for mRNA/cDNA for PIR48640 Gene

Expression for PIR48640 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48640 Gene

Orthologs for PIR48640 Gene

No data available for Orthologs and Evolution for PIR48640 Gene

Paralogs for PIR48640 Gene

No data available for Paralogs for PIR48640 Gene

Variants for PIR48640 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR48640 Gene

Disorders for PIR48640 Gene

No disorders were found for PIR48640 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48640 Gene

Publications for PIR48640 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR48640 Gene

Sources for PIR48640 Gene

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