Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR47863 Gene

Subcategory (RNA class) for PIR47863 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR47863 Gene

No Aliases found

ORGUL Members for PIR47863 Gene

No data available for External Ids for PIR47863 Gene

Summaries for PIR47863 Gene

GeneCards Summary for PIR47863 Gene

PIR47863 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47863 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47863

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47863 Gene

Genomics for PIR47863 Gene

Regulatory Elements for PIR47863 Gene

Enhancers for PIR47863 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G021974 1.2 ENCODE dbSUPER 0.7 +1.3 1299 1.4 PKNOX1 ZNF48 GLIS2 KLF7 ZNF263 SP3 SMARCB1 ZNF518A GLIS1 KDM1A CDKN2A MTAP CDKN2B UBA52P6 GC09M021977 PIR47863 CDKN2A-AS1
GH09G021986 1.3 Ensembl ENCODE dbSUPER 0.4 -11.4 -11441 2.6 TBP PKNOX1 ZSCAN4 NFRKB RFX5 YY1 ZSCAN5C MAFK ZBTB20 EZH2 CDKN2B CDKN2A-AS1 UBA52P6 CDKN2B-AS1 GC09M021977 PIR47863
GH09G021989 1.3 Ensembl ENCODE dbSUPER 0.4 -13.9 -13918 1.2 ZNF335 GLIS2 ZNF366 ZSCAN5C EGR2 ZNF263 ZNF202 ZNF398 ZNF623 PRDM6 CDKN2A-AS1 UBA52P6 CDKN2B CDKN2B-AS1 GC09M021977 PIR47863
GH09G021992 1.3 ENCODE dbSUPER 0.4 -18.4 -18405 3.7 HDGF PKNOX1 SIN3A ARID4B FEZF1 ZNF2 GLIS2 ZNF207 ZNF263 SP3 CDKN2B CDKN2B-AS1 PIR47863 GC09M021977
GH09G021978 0.5 dbSUPER 0.7 -3.1 -3149 1.7 CBX2 PRDM1 EZH2 CDKN2B UBA52P6 MTAP PIR47863 GC09M021977 CDKN2B-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR47863 on UCSC Golden Path with GeneCards custom track

Promoters for PIR47863 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000233975 1064 401 PKNOX1 KLF17 ZNF48 ZNF335 GLIS2 EGR1 KLF7 ZNF391 EGR2 ELK4

Genomic Location for PIR47863 Gene

Chromosome:
9
Start:
21,976,232 bp from pter
End:
21,976,264 bp from pter
Size:
33 bases
Orientation:
Minus strand

Genomic View for PIR47863 Gene

Genes around PIR47863 on UCSC Golden Path with GeneCards custom track

PIR47863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47863 Gene

ORGUL Member Location for PIR47863 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47863 Gene

Proteins for PIR47863 Gene

Post-translational modifications for PIR47863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47863 Gene

Domains & Families for PIR47863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47863 Gene

Function for PIR47863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47863 Gene

Localization for PIR47863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR47863 Gene

Pathways & Interactions for PIR47863 Gene

SuperPathways for PIR47863 Gene

No Data Available

Interacting Proteins for PIR47863 Gene

Gene Ontology (GO) - Biological Process for PIR47863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47863 Gene

Drugs & Compounds for PIR47863 Gene

No Compound Related Data Available

Transcripts for PIR47863 Gene

fRNAdb Secondary structures for PIR47863 Gene

  • FR268037

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47863 Gene

No ASD Table

Relevant External Links for PIR47863 Gene

GeneLoc Exon Structure for
PIR47863

No data available for mRNA/cDNA for PIR47863 Gene

Expression for PIR47863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47863 Gene

Orthologs for PIR47863 Gene

No data available for Orthologs and Evolution for PIR47863 Gene

Paralogs for PIR47863 Gene

No data available for Paralogs for PIR47863 Gene

Variants for PIR47863 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR47863 Gene

Disorders for PIR47863 Gene

No disorders were found for PIR47863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47863 Gene

Publications for PIR47863 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR47863 Gene

Sources for PIR47863 Gene

Content
Loading form....