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Aliases for PIR47119 Gene

Subcategory (RNA class) for PIR47119 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR47119 Gene

No Aliases found

ORGUL Members for PIR47119 Gene

Previous GeneCards Identifiers for PIR47119 Gene

  • GC20M047768

No data available for External Ids for PIR47119 Gene

Summaries for PIR47119 Gene

GeneCards Summary for PIR47119 Gene

PIR47119 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47119 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47119 Gene

Genomics for PIR47119 Gene

Regulatory Elements for PIR47119 Gene

Enhancers for PIR47119 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G049166 1.5 FANTOM5 Ensembl ENCODE 0.4 -15.7 -15734 2.4 PKNOX1 ZFP64 DMAP1 ZNF48 RAD21 ZNF335 ETV6 MIXL1 ZNF263 HMG20B CSE1L PREX1 ZNFX1 PIR47119 STAU1
GH20G049184 1.5 FANTOM5 ENCODE 0.3 -34.9 -34947 4.7 HNRNPUL1 HDGF FOXA2 PKNOX1 MLX CREB3L1 ARNT ZFP64 WRNIP1 ARID4B ARFGEF2 DDX27 CSE1L SNORD12B ZFAS1 STAU1 PREX1 PIR47119
GH20G049161 0.9 ENCODE 0.4 -10.1 -10091 1.3 ELF3 FOXA2 YBX1 ZBTB40 ZSCAN9 ZBTB7B ETV6 IKZF2 MIXL1 SMARCA5 CSE1L PIR47119 STAU1
GH20G049179 1.2 Ensembl ENCODE 0.3 -28.3 -28320 1.4 HNRNPUL1 PKNOX1 FOXA2 ARID4B YY1 ZNF121 FOS MIER2 PPARG TBX21 DDX27 CSE1L STAU1 PIR47119
GH20G049134 0.5 FANTOM5 0.4 +17.2 17154 0.1 ZNF623 CSE1L DDX27 STAU1 ZNFX1 ARPC3P1 PIR47119
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR47119 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR47119 Gene

Chromosome:
20
Start:
49,151,613 bp from pter
End:
49,151,639 bp from pter
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR47119 Gene

Genes around PIR47119 on UCSC Golden Path with GeneCards custom track

PIR47119 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47119 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47119 Gene

Proteins for PIR47119 Gene

Post-translational modifications for PIR47119 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47119 Gene

Domains & Families for PIR47119 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47119 Gene

Function for PIR47119 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47119 Gene

Localization for PIR47119 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR47119 Gene

Pathways & Interactions for PIR47119 Gene

SuperPathways for PIR47119 Gene

No Data Available

Interacting Proteins for PIR47119 Gene

Gene Ontology (GO) - Biological Process for PIR47119 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47119 Gene

Drugs & Compounds for PIR47119 Gene

No Compound Related Data Available

Transcripts for PIR47119 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47119 Gene

No ASD Table

Relevant External Links for PIR47119 Gene

GeneLoc Exon Structure for
PIR47119

No data available for mRNA/cDNA for PIR47119 Gene

Expression for PIR47119 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47119 Gene

Orthologs for PIR47119 Gene

No data available for Orthologs and Evolution for PIR47119 Gene

Paralogs for PIR47119 Gene

No data available for Paralogs for PIR47119 Gene

Variants for PIR47119 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR47119 Gene

Disorders for PIR47119 Gene

No disorders were found for PIR47119 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47119 Gene

Publications for PIR47119 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR47119 Gene

Sources for PIR47119 Gene

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