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Aliases for PIR46844 Gene

Subcategory (RNA class) for PIR46844 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR46844 Gene

No Aliases found

ORGUL Members for PIR46844 Gene

Previous GeneCards Identifiers for PIR46844 Gene

  • GC05P179270

No data available for External Ids for PIR46844 Gene

Summaries for PIR46844 Gene

GeneCards Summary for PIR46844 Gene

PIR46844 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46844 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46844 Gene

Genomics for PIR46844 Gene

Regulatory Elements for PIR46844 Gene

Enhancers for PIR46844 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G179836 1.2 ENCODE dbSUPER 0.7 -3.4 -3360 2.0 HDGF PKNOX1 MLX ARID4B DMAP1 RAD21 ZNF48 RARA SCRT2 FOS MRNIP LOC100996419 TBC1D9B MGAT4B SQSTM1 MIR1229 LTC4S MAML1 CBY3 RNF130
GH05G179838 1 ENCODE dbSUPER 0.7 -1.7 -1702 0.2 ARID4B CEBPG RAD21 THRB ZNF48 SLC30A9 POLR2A ELK1 FOS MAFK LOC100996419 MRNIP TBC1D9B SQSTM1 MGAT4B MIR1229 LTC4S MAML1 PIR46844 PIR36293
GH05G179839 1 ENCODE dbSUPER 0.7 -0.8 -797 0.9 CTCF KLF1 MAX RAD21 ZFHX2 EGR1 POLR2A SCRT2 ZNF600 EGR2 MRNIP TBC1D9B MGAT4B SQSTM1 MIR1229 LTC4S MAML1 PIR36293 PIR46844
GH05G179840 0.8 ENCODE dbSUPER 0.7 -0.2 -222 0.2 CTCF EGR1 POLR2A RAD21 TBC1D9B PIR36293 PIR46844
GH05G179841 0.6 ENCODE dbSUPER 0.7 +0.0 27 0.0 POLR2A PIR46844 RN7SKP150
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR46844 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR46844 Gene

Chromosome:
5
Start:
179,840,557 bp from pter
End:
179,840,584 bp from pter
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR46844 Gene

Genes around PIR46844 on UCSC Golden Path with GeneCards custom track

PIR46844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46844 Gene

Proteins for PIR46844 Gene

Post-translational modifications for PIR46844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46844 Gene

Domains & Families for PIR46844 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46844 Gene

Function for PIR46844 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46844 Gene

Localization for PIR46844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR46844 Gene

Pathways & Interactions for PIR46844 Gene

SuperPathways for PIR46844 Gene

No Data Available

Interacting Proteins for PIR46844 Gene

Gene Ontology (GO) - Biological Process for PIR46844 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46844 Gene

Drugs & Compounds for PIR46844 Gene

No Compound Related Data Available

Transcripts for PIR46844 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46844 Gene

No ASD Table

Relevant External Links for PIR46844 Gene

GeneLoc Exon Structure for
PIR46844

No data available for mRNA/cDNA for PIR46844 Gene

Expression for PIR46844 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46844 Gene

Orthologs for PIR46844 Gene

No data available for Orthologs and Evolution for PIR46844 Gene

Paralogs for PIR46844 Gene

No data available for Paralogs for PIR46844 Gene

Variants for PIR46844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR46844 Gene

Disorders for PIR46844 Gene

No disorders were found for PIR46844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46844 Gene

Publications for PIR46844 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR46844 Gene

Sources for PIR46844 Gene

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