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Aliases for PIR46708 Gene

Subcategory (RNA class) for PIR46708 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR46708 Gene

No Aliases found

ORGUL Members for PIR46708 Gene

Previous GeneCards Identifiers for PIR46708 Gene

  • GC04P002908

No data available for External Ids for PIR46708 Gene

Summaries for PIR46708 Gene

GeneCards Summary for PIR46708 Gene

PIR46708 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46708 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR46708

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46708 Gene

Genomics for PIR46708 Gene

Regulatory Elements for PIR46708 Gene

Enhancers for PIR46708 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G002907 0.7 ENCODE 0.7 +3.0 2992 1.2 PKNOX1 FOXA2 MAX RAD21 YY1 CTBP1 POLR2A HNF4G RFX1 ZHX2 NOP14-AS1 GC04P002904 PIR46708 MFSD10
GH04G002857 1.5 Ensembl ENCODE dbSUPER 0.3 -44.4 -44362 5.7 PKNOX1 ATF1 ARID4B FEZF1 YY1 TCF12 ZNF121 CBX5 KLF7 FOS GRK4 NOP14-AS1 NOP14 TNIP2 HTT GC04P002845 GC04P002844 GC04P002843 PIR46708 GC04P002904
GH04G002866 1.5 Ensembl ENCODE dbSUPER 0.3 -37.1 -37136 3.4 ATF1 FOXA2 ARNT ARID4B YY1 TCF12 ZNF766 ELK1 GATA2 ZNF263 GRK4 ADD1 TNIP2 MFSD10 NOP14-AS1 NOP14 GC04P002845 GC04P002844 GC04P002843 PIR46708
GH04G002930 1.4 ENCODE dbSUPER 0.3 +29.4 29362 8.2 HDGF PKNOX1 FOXA2 MLX AGO1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 GRK4 NOP14-AS1 HTT-AS HTT MFSD10 PIR46708 GC04P002904
GH04G002922 1 Ensembl ENCODE dbSUPER 0.4 +19.1 19146 3.6 PKNOX1 MXI1 ZBTB33 MNT GRK4 NOP14-AS1 TNIP2 NOP14 ADD1 MFSD10 GC04P002904 PIR46708
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR46708 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR46708 Gene

Chromosome:
4
Start:
2,904,840 bp from pter
End:
2,904,870 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR46708 Gene

Genes around PIR46708 on UCSC Golden Path with GeneCards custom track

PIR46708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR46708 Gene

ORGUL Member Location for PIR46708 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46708 Gene

Proteins for PIR46708 Gene

Post-translational modifications for PIR46708 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46708 Gene

Domains & Families for PIR46708 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46708 Gene

Function for PIR46708 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46708 Gene

Localization for PIR46708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR46708 Gene

Pathways & Interactions for PIR46708 Gene

SuperPathways for PIR46708 Gene

No Data Available

Interacting Proteins for PIR46708 Gene

Gene Ontology (GO) - Biological Process for PIR46708 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46708 Gene

Drugs & Compounds for PIR46708 Gene

No Compound Related Data Available

Transcripts for PIR46708 Gene

fRNAdb Secondary structures for PIR46708 Gene

  • FR289196

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46708 Gene

No ASD Table

Relevant External Links for PIR46708 Gene

GeneLoc Exon Structure for
PIR46708

No data available for mRNA/cDNA for PIR46708 Gene

Expression for PIR46708 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46708 Gene

Orthologs for PIR46708 Gene

No data available for Orthologs and Evolution for PIR46708 Gene

Paralogs for PIR46708 Gene

No data available for Paralogs for PIR46708 Gene

Variants for PIR46708 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR46708 Gene

Disorders for PIR46708 Gene

No disorders were found for PIR46708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46708 Gene

Publications for PIR46708 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR46708 Gene

Sources for PIR46708 Gene

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