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Aliases for PIR45308 Gene

Subcategory (RNA class) for PIR45308 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR45308 Gene

No Aliases found

ORGUL Members for PIR45308 Gene

Previous GeneCards Identifiers for PIR45308 Gene

  • GC09P136245
  • GC09P136246
  • GC09P136262
  • GC09P136284
  • GC09P133363
  • GC09P133374
  • GC09P133382
  • GC09P133390
  • GC09P133399
  • GC09P133409

No data available for External Ids for PIR45308 Gene

Summaries for PIR45308 Gene

GeneCards Summary for PIR45308 Gene

PIR45308 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45308 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR45308

Additional gene information for PIR45308 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45308 Gene

Genomics for PIR45308 Gene

Regulatory Elements for PIR45308 Gene

Enhancers for PIR45308 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H133352 0.9 ENCODE 0.7 +1.3 1313 0 HDAC1 ELF3 HDGF PKNOX1 ARNT ARID4B SIN3A ZSCAN9 RAD21 ZEB1 SETX GTF3C5 RPL7A DDX31 WDR5 SURF6 GC09P133429 SURF2 SNORD36C PIR45308
GH09H133351 0.7 ENCODE 0.7 +0.9 915 0 CTCF KLF1 USF2 ZEB2 SMARCB1 JUND POLR2A SMARCA4 TRIM28 SUPT5H SURF6 ADAMTS13 GC09P133429 PIR45308 SNORD36C SURF2
GH09H133355 1 ENCODE 0.4 +5.7 5682 2 HDGF PKNOX1 ATF1 SIN3A GLI4 BRCA1 ZNF2 ZBTB7B YY1 ETS1 SURF6 SURF1 SURF2 GC09P133429 SNORD36C PIR45308
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR45308 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR45308 Gene

Chromosome:
9
Start:
133,350,846 bp from pter
End:
133,350,878 bp from pter
Size:
33 bases
Orientation:
Plus strand

Genomic View for PIR45308 Gene

Genes around PIR45308 on UCSC Golden Path with GeneCards custom track

PIR45308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR45308 Gene

ORGUL Member Location for PIR45308 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45308 Gene

Proteins for PIR45308 Gene

Post-translational modifications for PIR45308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45308 Gene

Domains & Families for PIR45308 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45308 Gene

Function for PIR45308 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45308 Gene

Localization for PIR45308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45308 Gene

Pathways & Interactions for PIR45308 Gene

SuperPathways for PIR45308 Gene

No Data Available

Interacting Proteins for PIR45308 Gene

Gene Ontology (GO) - Biological Process for PIR45308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45308 Gene

Drugs & Compounds for PIR45308 Gene

No Compound Related Data Available

Transcripts for PIR45308 Gene

fRNAdb Secondary structures for PIR45308 Gene

  • FR372325

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45308 Gene

No ASD Table

Relevant External Links for PIR45308 Gene

GeneLoc Exon Structure for
PIR45308

No data available for mRNA/cDNA for PIR45308 Gene

Expression for PIR45308 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45308 Gene

Orthologs for PIR45308 Gene

No data available for Orthologs and Evolution for PIR45308 Gene

Paralogs for PIR45308 Gene

No data available for Paralogs for PIR45308 Gene

Variants for PIR45308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR45308 Gene

Disorders for PIR45308 Gene

No disorders were found for PIR45308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45308 Gene

Publications for PIR45308 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45308 Gene

Sources for PIR45308 Gene

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