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Aliases for PIR44270 Gene

Subcategory (RNA class) for PIR44270 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR44270 Gene

No Aliases found

ORGUL Members for PIR44270 Gene

No data available for External Ids for PIR44270 Gene

Summaries for PIR44270 Gene

GeneCards Summary for PIR44270 Gene

PIR44270 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44270 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44270 Gene

Genomics for PIR44270 Gene

Regulatory Elements for PIR44270 Gene

Enhancers for PIR44270 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G002393 1.5 Ensembl ENCODE dbSUPER 0.7 0.0 -35 0.8 HDGF ATF1 CREB3L1 GLIS2 ZNF766 GATA2 ELK1 CBX5 NCOA1 REST ZFYVE28 ENSG00000251148 MXD4 HAUS3 POLN LOC105374353 RNF4 NELFA C4orf48 PIR44270
GH04G002395 1.2 ENCODE dbSUPER 0.7 +1.9 1890 0.2 ATF1 ZNF766 CBX5 GATA2 NCOA1 REST ZNF592 MEF2D CREB3 MBD2 ZFYVE28 ENSG00000251148 MXD4 ENSG00000250623 PIR44270 GC04P002406
GH04G002390 1 FANTOM5 dbSUPER 0.7 -3.3 -3349 0.0 ESRRA ETV1 MAX RBBP5 ZIC2 ZNF766 POLR2A ZNF639 RNF2 E2F5 ZFYVE28 LOC105374353 RNF4 ENSG00000251148 MXD4 PIR52561 PIR44270
GH04G002401 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.5 8542 1.2 HDAC1 ATF1 PKNOX1 SIN3A ZNF48 RAD21 EGR1 KLF7 KLF13 EGR2 ZFYVE28 RNF4 LOC105374353 ENSG00000251148 MXD4 POLN HAUS3 C4orf48 NELFA GC04P002406
GH04G002391 0.8 Ensembl dbSUPER 0.7 -2.6 -2559 0.2 ZNF341 ZNF600 ZBTB33 MLLT1 CFAP99 ZFYVE28 ENSG00000251148 MXD4 LOC105374353 RNF4 PIR44270 PIR52561
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR44270 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR44270 Gene

Chromosome:
4
Start:
2,393,859 bp from pter
End:
2,393,886 bp from pter
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR44270 Gene

Genes around PIR44270 on UCSC Golden Path with GeneCards custom track

PIR44270 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44270 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44270 Gene

Proteins for PIR44270 Gene

Post-translational modifications for PIR44270 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR44270 Gene

Domains & Families for PIR44270 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR44270 Gene

Function for PIR44270 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR44270 Gene

Localization for PIR44270 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR44270 Gene

Pathways & Interactions for PIR44270 Gene

SuperPathways for PIR44270 Gene

No Data Available

Interacting Proteins for PIR44270 Gene

Gene Ontology (GO) - Biological Process for PIR44270 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44270 Gene

Drugs & Compounds for PIR44270 Gene

No Compound Related Data Available

Transcripts for PIR44270 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44270 Gene

No ASD Table

Relevant External Links for PIR44270 Gene

GeneLoc Exon Structure for
PIR44270

No data available for mRNA/cDNA for PIR44270 Gene

Expression for PIR44270 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44270 Gene

Orthologs for PIR44270 Gene

No data available for Orthologs and Evolution for PIR44270 Gene

Paralogs for PIR44270 Gene

No data available for Paralogs for PIR44270 Gene

Variants for PIR44270 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR44270 Gene

Disorders for PIR44270 Gene

No disorders were found for PIR44270 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44270 Gene

Publications for PIR44270 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR44270 Gene

Sources for PIR44270 Gene

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