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Aliases for PIR43986 Gene

Subcategory (RNA class) for PIR43986 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR43986 Gene

No Aliases found

Previous GeneCards Identifiers for PIR43986 Gene

  • GC06P035121
  • GC06P036782
  • GC06P038013
  • GC06P038635
  • GC06P039248
  • GC06P039805

No data available for External Ids for PIR43986 Gene

Summaries for PIR43986 Gene

GeneCards Summary for PIR43986 Gene

PIR43986 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43986 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR43986

Additional gene information for PIR43986 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43986 Gene

Genomics for PIR43986 Gene

Regulatory Elements for PIR43986 Gene

Enhancers for PIR43986 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H033903 1.5 FANTOM5 Ensembl ENCODE 0.7 0.0 -47 4 HDAC1 FOXA2 PKNOX1 TBL1XR1 ARNT RAD21 YY1 TCF12 GATA2 EGR1 RPL35P2 PHF1 ZBTB9 LEMD2 GC06P041519 PIR43986 PIR58172
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR43986 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR43986 Gene

Chromosome:
6
Start:
33,905,705 bp from pter
End:
33,905,743 bp from pter
Size:
39 bases
Orientation:
Plus strand

Genomic View for PIR43986 Gene

Genes around PIR43986 on UCSC Golden Path with GeneCards custom track

PIR43986 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43986 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR43986 Gene

ORGUL Member Location for PIR43986 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43986 Gene

Proteins for PIR43986 Gene

Post-translational modifications for PIR43986 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43986 Gene

Domains & Families for PIR43986 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43986 Gene

Function for PIR43986 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43986 Gene

Localization for PIR43986 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43986 Gene

Pathways & Interactions for PIR43986 Gene

SuperPathways for PIR43986 Gene

No Data Available

Interacting Proteins for PIR43986 Gene

Gene Ontology (GO) - Biological Process for PIR43986 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43986 Gene

Drugs & Compounds for PIR43986 Gene

No Compound Related Data Available

Transcripts for PIR43986 Gene

fRNAdb Secondary structures for PIR43986 Gene

  • FR318253
  • FR294125

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43986 Gene

No ASD Table

Relevant External Links for PIR43986 Gene

GeneLoc Exon Structure for
PIR43986

No data available for mRNA/cDNA for PIR43986 Gene

Expression for PIR43986 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43986 Gene

Orthologs for PIR43986 Gene

No data available for Orthologs and Evolution for PIR43986 Gene

Paralogs for PIR43986 Gene

No data available for Paralogs for PIR43986 Gene

Variants for PIR43986 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR43986 Gene

Disorders for PIR43986 Gene

No disorders were found for PIR43986 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43986 Gene

Publications for PIR43986 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR43986 Gene

Sources for PIR43986 Gene

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