Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR43677 Gene

Subcategory (RNA class) for PIR43677 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR43677 Gene

No Aliases found

ORGUL Members for PIR43677 Gene

Previous GeneCards Identifiers for PIR43677 Gene

  • GC0YP010045
  • GC0YP010052
  • GC0YP010059
  • GC0YP010072
  • GC0YP010201
  • GC0YP010202
  • GC0YP010203
  • GC0YP010204
  • GC0YP010205
  • GC0YP010207

No data available for External Ids for PIR43677 Gene

Summaries for PIR43677 Gene

GeneCards Summary for PIR43677 Gene

PIR43677 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43677 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43677 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43677 Gene

Genomics for PIR43677 Gene

Regulatory Elements for PIR43677 Gene

Enhancers for PIR43677 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YH010200 0.2 ENCODE 0.7 0.0 -26 0 GC0YP010211 GC0YP010213 GC0YP010215 PIR43677 RNA5-8SP6
GH0YH010627 0.2 ENCODE 0 +426.8 426847 0 ENSG00000273858 GC0YP010211 GC0YP010213 GC0YP010215 PIR43677
GH0YH010629 0.2 ENCODE 0 +429.7 429742 0 ENSG00000273858 GC0YP010211 GC0YP010213 GC0YP010215 PIR43677
GH0YH010628 0.2 ENCODE 0 +427.2 427197 0 ENSG00000273858 GC0YP010211 GC0YP010213 GC0YP010215 PIR43677
GH0YH010626 0.2 ENCODE 0 +426.6 426608 0 ENSG00000273858 PIR43677 GC0YP010211 GC0YP010213 GC0YP010215
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR43677 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR43677 Gene

Chromosome:
Y
Start:
10,200,235 bp from pter
End:
10,200,265 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR43677 Gene

Genes around PIR43677 on UCSC Golden Path with GeneCards custom track

PIR43677 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43677 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43677 Gene

Proteins for PIR43677 Gene

Post-translational modifications for PIR43677 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43677 Gene

Domains & Families for PIR43677 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43677 Gene

Function for PIR43677 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43677 Gene

Localization for PIR43677 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43677 Gene

Pathways & Interactions for PIR43677 Gene

SuperPathways for PIR43677 Gene

No Data Available

Interacting Proteins for PIR43677 Gene

Gene Ontology (GO) - Biological Process for PIR43677 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43677 Gene

Drugs & Compounds for PIR43677 Gene

No Compound Related Data Available

Transcripts for PIR43677 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43677 Gene

No ASD Table

Relevant External Links for PIR43677 Gene

GeneLoc Exon Structure for
PIR43677

No data available for mRNA/cDNA for PIR43677 Gene

Expression for PIR43677 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43677 Gene

Orthologs for PIR43677 Gene

No data available for Orthologs and Evolution for PIR43677 Gene

Paralogs for PIR43677 Gene

No data available for Paralogs for PIR43677 Gene

Variants for PIR43677 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR43677 Gene

Disorders for PIR43677 Gene

No disorders were found for PIR43677 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43677 Gene

Publications for PIR43677 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR43677 Gene

Sources for PIR43677 Gene

Content
Loading form....