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Aliases for PIR43647 Gene

Subcategory (RNA class) for PIR43647 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR43647 Gene

No Aliases found

ORGUL Members for PIR43647 Gene

Previous GeneCards Identifiers for PIR43647 Gene

  • GC05P085918
  • GC05P086621

No data available for External Ids for PIR43647 Gene

Summaries for PIR43647 Gene

GeneCards Summary for PIR43647 Gene

PIR43647 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43647 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43647 Gene

Genomics for PIR43647 Gene

Regulatory Elements for PIR43647 Gene

Enhancers for PIR43647 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G086643 0.6 ENCODE dbSUPER 0.3 +24.0 24015 2.5 CTBP2 COX7C RASA1 RNU6-804P GC05M086664 PIR43647
GH05G086646 0.6 ENCODE dbSUPER 0.3 +25.6 25599 0.2 POLR2A GC05M086664 RNU6-804P PIR43647
GH05G086648 0.4 dbSUPER 0.3 +29.4 29383 1.9 EP300 GC05M086664 RNU6-804P PIR43647
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR43647 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR43647 Gene

Chromosome:
5
Start:
86,620,540 bp from pter
End:
86,620,566 bp from pter
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR43647 Gene

Genes around PIR43647 on UCSC Golden Path with GeneCards custom track

PIR43647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43647 Gene

Proteins for PIR43647 Gene

Post-translational modifications for PIR43647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43647 Gene

Domains & Families for PIR43647 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43647 Gene

Function for PIR43647 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43647 Gene

Localization for PIR43647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR43647 Gene

Pathways & Interactions for PIR43647 Gene

SuperPathways for PIR43647 Gene

No Data Available

Interacting Proteins for PIR43647 Gene

Gene Ontology (GO) - Biological Process for PIR43647 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43647 Gene

Drugs & Compounds for PIR43647 Gene

No Compound Related Data Available

Transcripts for PIR43647 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43647 Gene

No ASD Table

Relevant External Links for PIR43647 Gene

GeneLoc Exon Structure for
PIR43647

No data available for mRNA/cDNA for PIR43647 Gene

Expression for PIR43647 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43647 Gene

Orthologs for PIR43647 Gene

No data available for Orthologs and Evolution for PIR43647 Gene

Paralogs for PIR43647 Gene

No data available for Paralogs for PIR43647 Gene

Variants for PIR43647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR43647 Gene

Disorders for PIR43647 Gene

No disorders were found for PIR43647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43647 Gene

Publications for PIR43647 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR43647 Gene

Sources for PIR43647 Gene

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