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Aliases for PIR42151 Gene

Subcategory (RNA class) for PIR42151 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR42151 Gene

No Aliases found

ORGUL Members for PIR42151 Gene

Previous GeneCards Identifiers for PIR42151 Gene

  • GC22M039527
  • GC22M039176
  • GC22M039832
  • GC22M039845
  • GC22M039941
  • GC22M040629
  • GC22M041077
  • GC22M041475

No data available for External Ids for PIR42151 Gene

Summaries for PIR42151 Gene

GeneCards Summary for PIR42151 Gene

PIR42151 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR42151 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR42151 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR42151 Gene

Genomics for PIR42151 Gene

GeneHancer (GH) Regulatory Elements for PIR42151 Gene

Promoters and enhancers for PIR42151 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I039131 Enhancer 1 Ensembl ENCODE dbSUPER 550.8 +0.1 57 0.8 CEBPB ZNF398 CEBPG THRB RARA TEAD3 EGR1 CEBPA BCL6 EGR2 PIR42151 ENSG00000279833 FUNDC2P4 CBX7 APOBEC3B-AS1 RPL3 APOBEC3G COX5BP7
GH22I039128 Enhancer 0.5 ENCODE 0.8 +2.1 2113 1.2 ELF3 GATAD2A NR2F1 NR2F6 HNF4A RXRB APOBEC3H APOBEC3B-AS1 SYNGR1 APOBEC3G APOBEC3C PIR42151 COX5BP7 CBX7
GH22I039122 Enhancer 0.6 ENCODE 0.4 +9.2 9237 0.1 CTCF ZNF654 TRIM22 RAD21 ZNF592 SCRT2 SMC3 ZNF143 MLLT1 COX5BP7 APOBEC3G PIR42151 CBX7
GH22I039123 Enhancer 0.5 Ensembl ENCODE 0.4 +7.1 7140 0.7 SCRT2 APOBEC3G COX5BP7 PIR42151 CBX7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR42151 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR42151 Gene

Genomic Locations for PIR42151 Gene
chr22:39,131,429-39,131,458
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr22:39,527,434-39,527,463
(GRCh37/hg19)

Genomic View for PIR42151 Gene

Genes around PIR42151 on UCSC Golden Path with GeneCards custom track

PIR42151 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR42151 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR42151 Gene

Proteins for PIR42151 Gene

Post-translational modifications for PIR42151 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR42151 Gene

Domains & Families for PIR42151 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR42151 Gene

Function for PIR42151 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR42151 Gene

Localization for PIR42151 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR42151 Gene

Pathways & Interactions for PIR42151 Gene

SuperPathways for PIR42151 Gene

No Data Available

Interacting Proteins for PIR42151 Gene

Gene Ontology (GO) - Biological Process for PIR42151 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR42151 Gene

Drugs & Compounds for PIR42151 Gene

No Compound Related Data Available

Transcripts for PIR42151 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR42151 Gene

No ASD Table

Relevant External Links for PIR42151 Gene

GeneLoc Exon Structure for
PIR42151

No data available for mRNA/cDNA for PIR42151 Gene

Expression for PIR42151 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR42151 Gene

Orthologs for PIR42151 Gene

No data available for Orthologs and Evolution for PIR42151 Gene

Paralogs for PIR42151 Gene

No data available for Paralogs for PIR42151 Gene

Variants for PIR42151 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR42151 Gene

Disorders for PIR42151 Gene

No disorders were found for PIR42151 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR42151 Gene

Publications for PIR42151 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR42151 Gene

Sources for PIR42151 Gene

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