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Aliases for PIR40977 Gene

Subcategory (RNA class) for PIR40977 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR40977 Gene

No Aliases found

ORGUL Members for PIR40977 Gene

Previous GeneCards Identifiers for PIR40977 Gene

  • GC04P001321

No data available for External Ids for PIR40977 Gene

Summaries for PIR40977 Gene

GeneCards Summary for PIR40977 Gene

PIR40977 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40977 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40977 Gene

Genomics for PIR40977 Gene

Regulatory Elements for PIR40977 Gene

Enhancers for PIR40977 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G001328 1.2 Ensembl ENCODE dbSUPER 0.7 +2.4 2403 3.1 ZNF639 GFI1B ZNF662 ZEB1 GATA3 ZNF791 JUND POLR2A TARDBP FOXP1 MAEA CRIPAK CTBP1-AS2 UVSSA ENSG00000272588 HAUS3 CTBP1 ENSG00000254094 PIR40977 GC04M001338
GH04G001323 0.7 ENCODE 0.7 -2.6 -2612 4.6 CTCF GFI1B SALL2 CDC5L MNT ZEB1 ZNF579 ZNF791 JUND POLR2A CTBP1-AS2 MAEA CRIPAK ENSG00000272588 HAUS3 CTBP1 PIR40977 GC04P001322
GH04G001336 0.9 ENCODE dbSUPER 0.4 +9.6 9616 1.4 PKNOX1 ESRRA JUN KLF17 ZSCAN21 GATA3 SCRT2 CREB1 ZNF600 ZBTB33 CRIPAK MAEA CTBP1-AS2 CTBP1 GC04M001338 PIR40977
GH04G001337 0.6 ENCODE 0.4 +8.4 8378 0.8 DDX20 CEBPB CEBPG PPARGC1A ZSCAN23 ZSCAN21 CEBPA KDM1A CRIPAK CTBP1 CTBP1-AS2 GC04M001338 PIR40977
GH04G001332 0.2 ENCODE 0.7 +4.3 4267 0.5 MAEA CTBP1 CTBP1-AS2 PIR40977 GC04M001338
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR40977 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR40977 Gene

Chromosome:
4
Start:
1,328,072 bp from pter
End:
1,328,098 bp from pter
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR40977 Gene

Genes around PIR40977 on UCSC Golden Path with GeneCards custom track

PIR40977 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40977 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40977 Gene

Proteins for PIR40977 Gene

Post-translational modifications for PIR40977 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40977 Gene

Domains & Families for PIR40977 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40977 Gene

Function for PIR40977 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40977 Gene

Localization for PIR40977 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR40977 Gene

Pathways & Interactions for PIR40977 Gene

SuperPathways for PIR40977 Gene

No Data Available

Interacting Proteins for PIR40977 Gene

Gene Ontology (GO) - Biological Process for PIR40977 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40977 Gene

Drugs & Compounds for PIR40977 Gene

No Compound Related Data Available

Transcripts for PIR40977 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40977 Gene

No ASD Table

Relevant External Links for PIR40977 Gene

GeneLoc Exon Structure for
PIR40977

No data available for mRNA/cDNA for PIR40977 Gene

Expression for PIR40977 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40977 Gene

Orthologs for PIR40977 Gene

No data available for Orthologs and Evolution for PIR40977 Gene

Paralogs for PIR40977 Gene

No data available for Paralogs for PIR40977 Gene

Variants for PIR40977 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR40977 Gene

Disorders for PIR40977 Gene

No disorders were found for PIR40977 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40977 Gene

Publications for PIR40977 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR40977 Gene

Sources for PIR40977 Gene

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