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Aliases for PIR40852 Gene

Subcategory (RNA class) for PIR40852 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR40852 Gene

No Aliases found

ORGUL Members for PIR40852 Gene

Previous GeneCards Identifiers for PIR40852 Gene

  • GC08M125970
  • GC08M126115
  • GC08M126371
  • GC08M126520
  • GC08M126710
  • GC08M124962
  • GC08M125103
  • GC08M125234
  • GC08M125367
  • GC08M125503

No data available for External Ids for PIR40852 Gene

Summaries for PIR40852 Gene

GeneCards Summary for PIR40852 Gene

PIR40852 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40852 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR40852

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40852 Gene

Genomics for PIR40852 Gene

Regulatory Elements for PIR40852 Gene

Enhancers for PIR40852 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G124920 0.9 ENCODE 0.7 +0.3 256 1.1 HDAC1 TBP ATF1 ZNF48 ZBTB40 RARA CHAMP1 TCF12 ZNF766 SIRT6 MTSS1 LOC105375744 SQLE LINC00964 PIR55713 PIR40852 GC08M125804 GC08M125787
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR40852 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR40852 Gene

Chromosome:
8
Start:
124,921,538 bp from pter
End:
124,921,568 bp from pter
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR40852 Gene

Genes around PIR40852 on UCSC Golden Path with GeneCards custom track

PIR40852 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40852 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR40852 Gene

ORGUL Member Location for PIR40852 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40852 Gene

Proteins for PIR40852 Gene

Post-translational modifications for PIR40852 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40852 Gene

Domains & Families for PIR40852 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40852 Gene

Function for PIR40852 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40852 Gene

Localization for PIR40852 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR40852 Gene

Pathways & Interactions for PIR40852 Gene

SuperPathways for PIR40852 Gene

No Data Available

Interacting Proteins for PIR40852 Gene

Gene Ontology (GO) - Biological Process for PIR40852 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40852 Gene

Drugs & Compounds for PIR40852 Gene

No Compound Related Data Available

Transcripts for PIR40852 Gene

fRNAdb Secondary structures for PIR40852 Gene

  • FR042325

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40852 Gene

No ASD Table

Relevant External Links for PIR40852 Gene

GeneLoc Exon Structure for
PIR40852

No data available for mRNA/cDNA for PIR40852 Gene

Expression for PIR40852 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40852 Gene

Orthologs for PIR40852 Gene

No data available for Orthologs and Evolution for PIR40852 Gene

Paralogs for PIR40852 Gene

No data available for Paralogs for PIR40852 Gene

Variants for PIR40852 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR40852 Gene

Disorders for PIR40852 Gene

No disorders were found for PIR40852 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40852 Gene

Publications for PIR40852 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR40852 Gene

Sources for PIR40852 Gene

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