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Aliases for PIR39505 Gene

Subcategory (RNA class) for PIR39505 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR39505 Gene

No Aliases found

ORGUL Members for PIR39505 Gene

Previous GeneCards Identifiers for PIR39505 Gene

  • GC04P069746

No data available for External Ids for PIR39505 Gene

Summaries for PIR39505 Gene

GeneCards Summary for PIR39505 Gene

PIR39505 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR39505 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR39505 Gene

Genomics for PIR39505 Gene

Regulatory Elements for PIR39505 Gene

Enhancers for PIR39505 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G068883 1.1 ENCODE dbSUPER 0.7 +2.7 2698 1.2 SOX13 DRAP1 FOXA2 ATF1 ARID4B CEBPG ZNF644 RARA YY1 TEAD3 LOC100422026 UGT2A3 ENSG00000272626 PIR39505 ENSG00000248547
GH04G068881 0.4 ENCODE 0.7 0.0 -47 0.2 KLF1 ENSG00000272626 PIR39505 ENSG00000251529
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR39505 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR39505 Gene

Chromosome:
4
Start:
68,881,144 bp from pter
End:
68,881,170 bp from pter
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR39505 Gene

Genes around PIR39505 on UCSC Golden Path with GeneCards custom track

PIR39505 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR39505 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR39505 Gene

Proteins for PIR39505 Gene

Post-translational modifications for PIR39505 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR39505 Gene

Domains & Families for PIR39505 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR39505 Gene

Function for PIR39505 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR39505 Gene

Localization for PIR39505 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR39505 Gene

Pathways & Interactions for PIR39505 Gene

SuperPathways for PIR39505 Gene

No Data Available

Interacting Proteins for PIR39505 Gene

Gene Ontology (GO) - Biological Process for PIR39505 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR39505 Gene

Drugs & Compounds for PIR39505 Gene

No Compound Related Data Available

Transcripts for PIR39505 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR39505 Gene

No ASD Table

Relevant External Links for PIR39505 Gene

GeneLoc Exon Structure for
PIR39505

No data available for mRNA/cDNA for PIR39505 Gene

Expression for PIR39505 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR39505 Gene

Orthologs for PIR39505 Gene

No data available for Orthologs and Evolution for PIR39505 Gene

Paralogs for PIR39505 Gene

No data available for Paralogs for PIR39505 Gene

Variants for PIR39505 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR39505 Gene

Disorders for PIR39505 Gene

No disorders were found for PIR39505 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR39505 Gene

Publications for PIR39505 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR39505 Gene

Sources for PIR39505 Gene

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