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Aliases for PIR38581 Gene

Subcategory (RNA class) for PIR38581 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR38581 Gene

No Aliases found

ORGUL Members for PIR38581 Gene

Previous GeneCards Identifiers for PIR38581 Gene

  • GC02P098263

No data available for External Ids for PIR38581 Gene

Summaries for PIR38581 Gene

GeneCards Summary for PIR38581 Gene

PIR38581 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR38581 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR38581 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR38581 Gene

Genomics for PIR38581 Gene

GeneHancer (GH) Regulatory Elements for PIR38581 Gene

Promoters and enhancers for PIR38581 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I097644 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 -1.3 -1254 2.8 HDGF PKNOX1 SMAD1 ZFP64 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 PIR38581 COX5B ACTR1B TMEM131 UNC50 LOC100506123 ANKRD36 C2orf92
GH02I097660 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +15.4 15381 5 HDGF PKNOX1 CLOCK SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZBTB7B IRF4 C2orf92 GC02M097664 ACTR1B ANKRD36B ZAP70 TMEM131 UNC50 LOC100506123 RNU4-8P PIR38581
GH02I097653 Enhancer 0.6 dbSUPER 0.4 +6.9 6911 1.4 PAF1 ZNF687 L3MBTL2 POLR2A IKZF1 EBF1 MGA SETDB1 ZAP70 C2orf92 ACTR1B PIR38581
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR38581 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR38581 Gene

Genomic Locations for PIR38581 Gene
chr2:97,647,413-97,647,442
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr2:98,263,876-98,263,905
(GRCh37/hg19)

Genomic View for PIR38581 Gene

Genes around PIR38581 on UCSC Golden Path with GeneCards custom track

PIR38581 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR38581 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR38581 Gene

Proteins for PIR38581 Gene

Post-translational modifications for PIR38581 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR38581 Gene

Domains & Families for PIR38581 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR38581 Gene

Function for PIR38581 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR38581 Gene

Localization for PIR38581 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR38581 Gene

Pathways & Interactions for PIR38581 Gene

SuperPathways for PIR38581 Gene

No Data Available

Interacting Proteins for PIR38581 Gene

Gene Ontology (GO) - Biological Process for PIR38581 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR38581 Gene

Drugs & Compounds for PIR38581 Gene

No Compound Related Data Available

Transcripts for PIR38581 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR38581 Gene

No ASD Table

Relevant External Links for PIR38581 Gene

GeneLoc Exon Structure for
PIR38581

No data available for mRNA/cDNA for PIR38581 Gene

Expression for PIR38581 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR38581 Gene

Orthologs for PIR38581 Gene

No data available for Orthologs and Evolution for PIR38581 Gene

Paralogs for PIR38581 Gene

No data available for Paralogs for PIR38581 Gene

Variants for PIR38581 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR38581 Gene

Disorders for PIR38581 Gene

No disorders were found for PIR38581 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR38581 Gene

Publications for PIR38581 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR38581 Gene

Sources for PIR38581 Gene

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