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Aliases for PIR37989 Gene

Subcategory (RNA class) for PIR37989 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR37989 Gene

No Aliases found

ORGUL Members for PIR37989 Gene

Previous GeneCards Identifiers for PIR37989 Gene

  • GC19P004401

No data available for External Ids for PIR37989 Gene

Summaries for PIR37989 Gene

GeneCards Summary for PIR37989 Gene

PIR37989 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37989 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37989 Gene

Genomics for PIR37989 Gene

Regulatory Elements for PIR37989 Gene

Enhancers for PIR37989 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G004396 1 Ensembl ENCODE dbSUPER 0.7 -3.2 -3152 1.1 POLR2A ZNF10 HNF4A RBFOX2 CHAF1A UBXN6 PIR37989 ENSG00000267980
GH19G004388 1.5 Ensembl ENCODE dbSUPER 0.4 -8.6 -8620 7.3 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF48 YY1 SLC30A9 ZNF121 GATA2 ENSG00000267769 CHAF1A UBXN6 SH3GL1 MATK ENSG00000267980 PIR37989
GH19G004367 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -25.5 -25508 14.8 CREB3L1 MLX AGO1 DMAP1 ZNF143 ZNF263 NFYC TBX21 MEF2D SSRP1 ENSG00000267769 SEMA6B CHAF1A SH3GL1 UBXN6 CACTIN ENSG00000267030 TMIGD2 FSD1 ENSG00000267980
GH19G004385 1 ENCODE dbSUPER 0.4 -14.6 -14598 2.4 CTCF MLX SAP130 ARID4B CEBPG ZNF384 ZIC2 ZNF121 ZNF316 ZFHX2 CHAF1A ENSG00000267980 PIR37989
GH19G004384 0.6 ENCODE dbSUPER 0.4 -16.1 -16074 0.1 POLR2A PIR37989 ENSG00000267980
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR37989 on UCSC Golden Path with GeneCards custom track

Promoters for PIR37989 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000287108 -328 1601 HDGF PKNOX1 CREB3L1 MLX ARNT AGO1 WRNIP1 ARID4B SIN3A YBX1

Genomic Location for PIR37989 Gene

Chromosome:
19
Start:
4,400,328 bp from pter
End:
4,400,355 bp from pter
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR37989 Gene

Genes around PIR37989 on UCSC Golden Path with GeneCards custom track

PIR37989 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37989 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37989 Gene

Proteins for PIR37989 Gene

Post-translational modifications for PIR37989 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR37989 Gene

Domains & Families for PIR37989 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR37989 Gene

Function for PIR37989 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37989 Gene

Localization for PIR37989 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR37989 Gene

Pathways & Interactions for PIR37989 Gene

SuperPathways for PIR37989 Gene

No Data Available

Interacting Proteins for PIR37989 Gene

Gene Ontology (GO) - Biological Process for PIR37989 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37989 Gene

Drugs & Compounds for PIR37989 Gene

No Compound Related Data Available

Transcripts for PIR37989 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37989 Gene

No ASD Table

Relevant External Links for PIR37989 Gene

GeneLoc Exon Structure for
PIR37989

No data available for mRNA/cDNA for PIR37989 Gene

Expression for PIR37989 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37989 Gene

Orthologs for PIR37989 Gene

No data available for Orthologs and Evolution for PIR37989 Gene

Paralogs for PIR37989 Gene

No data available for Paralogs for PIR37989 Gene

Variants for PIR37989 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR37989 Gene

Disorders for PIR37989 Gene

No disorders were found for PIR37989 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37989 Gene

Publications for PIR37989 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR37989 Gene

Sources for PIR37989 Gene

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