Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR36896 Gene

Subcategory (RNA class) for PIR36896 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR36896 Gene

No Aliases found

ORGUL Members for PIR36896 Gene

No data available for External Ids for PIR36896 Gene

Summaries for PIR36896 Gene

GeneCards Summary for PIR36896 Gene

PIR36896 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36896 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR36896 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36896 Gene

Genomics for PIR36896 Gene

Regulatory Elements for PIR36896 Gene

Enhancers for PIR36896 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H003384 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -40.5 -40456 6 HDGF PKNOX1 ATF1 TBL1XR1 BMI1 BATF DNMT3B ZBTB40 YY1 ATF7 RGS12 HGFAC DOK7 HTT PIR55428 PIR36896
GH04H003407 1 ENCODE 0.4 -19.7 -19720 1 ATF1 MLX ZFP64 ARID4B DMAP1 YY1 SLC30A9 SP5 ZHX2 MXD4 HGFAC DOK7 PIR36896 PIR55428
GH04H003372 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -55.1 -55074 1 PKNOX1 BACH1 MAX BMI1 EBF1 POLR2A EED RUNX3 IKZF2 CREM SH3BP2 RGS12 HTT-AS PIR55428 PIR36896
GH04H003368 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.6 -57644 3 RING1 MXI1 KLF1 ZBTB21 JUN MAX BMI1 FEZF1 ZIC2 ZNF366 NOP14-AS1 TMEM128 FAM193A ZBTB49 RGS12 PIR55428 PIR36896
GH04H003401 0.8 Ensembl ENCODE dbSUPER 0.3 -25.5 -25466 2 RGS12 DOK7 HTT PIR36896 PIR55428
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR36896 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR36896 Gene

Chromosome:
4
Start:
3,428,091 bp from pter
End:
3,428,120 bp from pter
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR36896 Gene

Genes around PIR36896 on UCSC Golden Path with GeneCards custom track

PIR36896 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36896 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36896 Gene

Proteins for PIR36896 Gene

Post-translational modifications for PIR36896 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36896 Gene

Domains & Families for PIR36896 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36896 Gene

Function for PIR36896 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36896 Gene

Localization for PIR36896 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR36896 Gene

Pathways & Interactions for PIR36896 Gene

SuperPathways for PIR36896 Gene

No Data Available

Interacting Proteins for PIR36896 Gene

Gene Ontology (GO) - Biological Process for PIR36896 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36896 Gene

Drugs & Compounds for PIR36896 Gene

No Compound Related Data Available

Transcripts for PIR36896 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36896 Gene

No ASD Table

Relevant External Links for PIR36896 Gene

GeneLoc Exon Structure for
PIR36896

No data available for mRNA/cDNA for PIR36896 Gene

Expression for PIR36896 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36896 Gene

Orthologs for PIR36896 Gene

No data available for Orthologs and Evolution for PIR36896 Gene

Paralogs for PIR36896 Gene

No data available for Paralogs for PIR36896 Gene

Variants for PIR36896 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR36896 Gene

Disorders for PIR36896 Gene

No disorders were found for PIR36896 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36896 Gene

Publications for PIR36896 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR36896 Gene

Sources for PIR36896 Gene

Content
Loading form....