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Aliases for PIR36342 Gene

Subcategory (RNA class) for PIR36342 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR36342 Gene

No Aliases found

ORGUL Members for PIR36342 Gene

Previous GeneCards Identifiers for PIR36342 Gene

  • GC02M112467

No data available for External Ids for PIR36342 Gene

Summaries for PIR36342 Gene

GeneCards Summary for PIR36342 Gene

PIR36342 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36342 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36342 Gene

Genomics for PIR36342 Gene

Regulatory Elements for PIR36342 Gene

Enhancers for PIR36342 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G224072 1.1 Ensembl ENCODE 0.7 -2.2 -2216 1.8 PKNOX1 SIN3A BMI1 GATA2 CBX5 ETV6 RELB FOS CREM IKZF2 SERPINE2 PIR36342 GC02M224071 LOC100420435
GH02G224084 1.1 Ensembl ENCODE 0.4 -15.2 -15231 2.8 TBP PKNOX1 SIN3A RAD21 BRCA1 RFX5 ZNF207 ETV6 FOS RELB SERPINE2 GC02M224071 PIR36342 LOC100420435
GH02G224101 1.2 Ensembl ENCODE 0.3 -32.6 -32596 4.4 ELF3 PKNOX1 FOXA2 MLX ARID4B RAD21 THRB RARA FOS CREM PIR36342 GC02M224071 LOC100420435
GH02G224145 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -75.8 -75842 2.6 FOXA2 ATF1 MLX ARID4B SLC30A9 GATA2 FOS SP5 MIER2 PPARG LOC100420435 GC02M224071 PIR36342
GH02G224141 0.9 Ensembl ENCODE 0.2 -71.8 -71763 1.4 CTCF JUND GATA2 JUN CEBPB FOS EP300 TCF7L2 LOC100420435 PIR36342 GC02M224071
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR36342 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR36342 Gene

Chromosome:
2
Start:
224,070,883 bp from pter
End:
224,070,913 bp from pter
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR36342 Gene

Genes around PIR36342 on UCSC Golden Path with GeneCards custom track

PIR36342 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36342 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36342 Gene

Proteins for PIR36342 Gene

Post-translational modifications for PIR36342 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36342 Gene

Domains & Families for PIR36342 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36342 Gene

Function for PIR36342 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36342 Gene

Localization for PIR36342 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PIR36342 Gene

Pathways & Interactions for PIR36342 Gene

SuperPathways for PIR36342 Gene

No Data Available

Interacting Proteins for PIR36342 Gene

Gene Ontology (GO) - Biological Process for PIR36342 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36342 Gene

Drugs & Compounds for PIR36342 Gene

No Compound Related Data Available

Transcripts for PIR36342 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36342 Gene

No ASD Table

Relevant External Links for PIR36342 Gene

GeneLoc Exon Structure for
PIR36342

No data available for mRNA/cDNA for PIR36342 Gene

Expression for PIR36342 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36342 Gene

Orthologs for PIR36342 Gene

No data available for Orthologs and Evolution for PIR36342 Gene

Paralogs for PIR36342 Gene

No data available for Paralogs for PIR36342 Gene

Variants for PIR36342 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR36342 Gene

Disorders for PIR36342 Gene

No disorders were found for PIR36342 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36342 Gene

Publications for PIR36342 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for PIR36342 Gene

Sources for PIR36342 Gene

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