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Aliases for PIR35890 Gene

Subcategory (RNA class) for PIR35890 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR35890 Gene

No Aliases found

ORGUL Members for PIR35890 Gene

Previous GeneCards Identifiers for PIR35890 Gene

  • GC09P069382
  • GC09P064370
  • GC09P064371
  • GC09P064372
  • GC09P064373
  • GC09P064374
  • GC09P064375

No data available for External Ids for PIR35890 Gene

Summaries for PIR35890 Gene

GeneCards Summary for PIR35890 Gene

PIR35890 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35890 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR35890

Additional gene information for PIR35890 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35890 Gene

Genomics for PIR35890 Gene

Regulatory Elements for PIR35890 Gene


Promoters for PIR35890 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000235327 -22 1000 SMARCA5 CTCF RB1 NRF1 NR2F1 TRIM22 ZNF76 ELF1 REST ZBTB8A

Genomic Location for PIR35890 Gene

Chromosome:
9
Start:
64,369,722 bp from pter
End:
64,369,752 bp from pter
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR35890 Gene

Genes around PIR35890 on UCSC Golden Path with GeneCards custom track

PIR35890 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35890 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR35890 Gene

ORGUL Member Location for PIR35890 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35890 Gene

Proteins for PIR35890 Gene

Post-translational modifications for PIR35890 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR35890 Gene

Domains & Families for PIR35890 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR35890 Gene

Function for PIR35890 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35890 Gene

Localization for PIR35890 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35890 Gene

Pathways & Interactions for PIR35890 Gene

SuperPathways for PIR35890 Gene

No Data Available

Interacting Proteins for PIR35890 Gene

Gene Ontology (GO) - Biological Process for PIR35890 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35890 Gene

Drugs & Compounds for PIR35890 Gene

No Compound Related Data Available

Transcripts for PIR35890 Gene

fRNAdb Secondary structures for PIR35890 Gene

  • FR060696

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35890 Gene

No ASD Table

Relevant External Links for PIR35890 Gene

GeneLoc Exon Structure for
PIR35890

No data available for mRNA/cDNA for PIR35890 Gene

Expression for PIR35890 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35890 Gene

Orthologs for PIR35890 Gene

No data available for Orthologs and Evolution for PIR35890 Gene

Paralogs for PIR35890 Gene

No data available for Paralogs for PIR35890 Gene

Variants for PIR35890 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR35890 Gene

Disorders for PIR35890 Gene

No disorders were found for PIR35890 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35890 Gene

Publications for PIR35890 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35890 Gene

Sources for PIR35890 Gene

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