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Aliases for PIR32620 Gene

Subcategory (RNA class) for PIR32620 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR32620 Gene

No Aliases found

ORGUL Members for PIR32620 Gene

No data available for External Ids for PIR32620 Gene

Summaries for PIR32620 Gene

GeneCards Summary for PIR32620 Gene

PIR32620 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR32620 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR32620 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR32620 Gene

Genomics for PIR32620 Gene

Regulatory Elements for PIR32620 Gene

Enhancers for PIR32620 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H004640 0.9 ENCODE 0.7 -2.1 -2082 2 ELF3 TBP MLX ARID4B RAD21 THRB ZSCAN9 RARA ETS1 CREM PIR32620 PIR33592
GH04H004659 1.1 Ensembl ENCODE 0.4 +16.3 16302 1 ATF1 JUN ETV1 ZNF175 CEBPG FOSL1 ZNF316 FOS ZNF600 ZNF584 ZBTB49 PIR32620 GC04M004686
GH04H004665 1.1 Ensembl ENCODE 0.3 +23.9 23881 3 BCOR CTCF FOXA2 MAX ZMYM3 RAD21 RELA FOSL1 POLR2A SMC3 ZBTB49 PIR32620 GC04M004686
GH04H004673 1 Ensembl ENCODE 0.3 +29.3 29344 0 HDGF PKNOX1 KLF1 ZFHX2 CTBP1 FOXK2 EGR1 ZNF366 KLF7 ATF7 GC04M004686 PIR32620
GH04H004625 0.6 ENCODE 0.4 -18.0 -18019 0 ESRRA CEBPB REST CEBPG ATF2 GATA3 KLF16 POLR2A FOXP2 PIR33592 PIR32620
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIR32620 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIR32620 Gene

Chromosome:
4
Start:
4,643,857 bp from pter
End:
4,643,888 bp from pter
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR32620 Gene

Genes around PIR32620 on UCSC Golden Path with GeneCards custom track

PIR32620 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR32620 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR32620 Gene

Proteins for PIR32620 Gene

Post-translational modifications for PIR32620 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR32620 Gene

Domains & Families for PIR32620 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR32620 Gene

Function for PIR32620 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR32620 Gene

Localization for PIR32620 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR32620 Gene

Pathways & Interactions for PIR32620 Gene

SuperPathways for PIR32620 Gene

No Data Available

Interacting Proteins for PIR32620 Gene

Gene Ontology (GO) - Biological Process for PIR32620 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR32620 Gene

Drugs & Compounds for PIR32620 Gene

No Compound Related Data Available

Transcripts for PIR32620 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR32620 Gene

No ASD Table

Relevant External Links for PIR32620 Gene

GeneLoc Exon Structure for
PIR32620

No data available for mRNA/cDNA for PIR32620 Gene

Expression for PIR32620 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR32620 Gene

Orthologs for PIR32620 Gene

No data available for Orthologs and Evolution for PIR32620 Gene

Paralogs for PIR32620 Gene

No data available for Paralogs for PIR32620 Gene

Variants for PIR32620 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for PIR32620 Gene

Disorders for PIR32620 Gene

No disorders were found for PIR32620 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR32620 Gene

Publications for PIR32620 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR32620 Gene

Sources for PIR32620 Gene

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