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Aliases & Descriptions for PIM1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.7.11.1 3 | | OTTHUMP00000018046 2 | | PIM 2 |
| | | Descriptions |
|---|
| Oncogene PIM1 2 | | non-specific serine/threonine protein kinase 2 | | pim-1 kinase 44 kDa isoform 2 | | pim-1 oncogene 2 | | pim-1 oncogene (proviral integration site 1) 2 |
|
| | Search outside databases for aliases for PIM1 genePrevious GC identifers: GC06P037140 GC06P037184 |
Summaries for PIM1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PIM1: The protooncogene PIM1 encodes a protein kinase upregulated in prostate cancer (Dhanasekaran et al., 2001 [PubMed 11518967]).[supplied by OMIM] UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309Function: Plays a role in signal transduction in blood cells. Contributes to both cell proliferation and survival and thus provide a selective advantage in tumorigenesis. May affect the structure or silencing of chromatin by phosphorylating HP1 gamma/CBX3Gene Wiki entry for PIM1 |
Genomic Location for PIM1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PIM1 gene 
Entrez Gene cytogenetic band: 6p21.2 Ensembl cytogenetic band: 6p21.2 HGNC cytogenetic band: 6p21PIM1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure GeneLoc location for GC06P037245:
(about GC identifiers)
Start:
|
37,245,964 bp from pter |
End:
|
37,251,182 bp from pter |
Size:
|
5,219 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000006.10 NT_007592.14
| Proteins for PIM1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309 (See
protein sequence)Recommended Name: Proto-oncogene serine/threonine-protein kinase Pim-1 Size: 404 amino acids; 45412 Da
Cofactor: Manganese
Subunit: Binds to RP9. Isoform 2 is isolated as a monomer whereas isoform 1 complexes with other proteins. Isoform 1, but not isoform 2, binds BMX
Subcellular location: Isoform 2: Cytoplasm. Nucleus
Subcellular location: Isoform 1: Cell membrane
PDB structures from and Proteopedia :1XQZ (3D)
 1XR1 (3D)
 1XWS (3D)
 1YHS (3D)
 1YI3 (3D)
 1YI4 (3D)
 1YWV (3D)
 1YXS (3D)
 1YXT (3D)
 1YXU (3D)
 1YXV (3D)
 1YXX (3D)
 2BIK (3D)
 2BIL (3D)
 2BZH (3D)
 2BZI (3D)
 2BZJ (3D)
 2BZK (3D)
 2C3I (3D)
 2J2I (3D)
 2O3P (3D)
 2O63 (3D)
 2O64 (3D)
 2O65 (3D)
 2OBJ (3D)
 2OI4 (3D)
 3BGP (3D)
 3BGQ (3D)
 3BGZ (3D)
 3BWF (3D)
 3C4E (3D)
 3CXW (3D)
 3CY2 (3D)
 3CY3 (3D)
 3DCV (3D)
 3F2A (3D)
 
Secondary accessions: Q38RT9 Q96RG3Alternative initiation: 2 isoforms: P11309-1 P11309-2 Post-translational modifications:
Autophosphorylated on both serine/threonine and tyrosine residues1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002639.1
ENSEMBL proteins: ENSP00000362608 ENSP00000362606
Human Recombinant Proteins  | Invitrogen human recombinant proteins for PIM1 |  | Millipore Purified and/or Recombinant PIM1 Protein |  | Sigma-Aldrich Proteins and CompoZr ZFN for PIM1  |  | R&D Systems Recombinant & Natural Proteins for PIM1 |  | Enzo Life Sciences proteins for PIM1 |  | Recombinant Proteins from Abcam (PIM1) |  | Human Recombinant Proteins from Abnova (PIM1) |               OriGene Purified Recombinant Human Protein: PIM1 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for PIM1: Assays for PIM1: | Protein
Domains/ Families for PIM1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P11309
ProtoNet protein and cluster: P11309 UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309Similarity: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamilySimilarity: Contains 1 protein kinase domain | Gene Function for PIM1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002648
Applied Biosystems Silencer® siRNAs for PIM1
Sigma-Aldrich siRNA and siRNA Panels for PIM1  Sigma-Aldrich shRNA Panels and shRNA for PIM1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002648                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002648                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002648 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002648
UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309Function: Plays a role in signal transduction in blood cells. Contributes to both cell proliferation and survival and thus provide a selective advantage in tumorigenesis. May affect the structure or silencing of chromatin by phosphorylating HP1 gamma/CBX3Catalytic activity: ATP + a protein = ADP + a phosphoproteinInduction: Strongly induced in leukocytes by the JAK/STAT pathway in response to cytokinesEnzyme Number (IUBMB): EC 2.7.11.1 Genatlas biochemistry entry for PIM1:pim-1 oncogene3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Pim1):
5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7
): About this table | Pathways & Interactions for PIM1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
4 Sigma-Aldrich "Your Favorite Gene" Pathways for PIM1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for PIM1 
5/26 Interacting proteins for PIM1 (P113091, 2 ENSP000003626063) via UniProtKB, MINT, and/or STRING (see all 26
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for PIM1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for PIM1 available from Tocris Bioscience About this table
9 Novoseek chemical compound relationships for PIM1 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| threonine |
77.22 |
39 |
1713213 (4), 9099695 (2), 11591366 (2), 7704900 (1) (see all 32) |
| amp-pnp |
47.66 |
4 |
15808862 (2), 16227208 (1) |
| tyrosine |
47.44 |
15 |
7527668 (3), 14764533 (1), 1713213 (1), 9099695 (1) (see all 11) |
| gp 130 |
40.02 |
3 |
10626893 (2), 18292512 (1) |
| ionomycin |
12.87 |
6 |
7704900 (4), 9419425 (1) |
| proline |
11.12 |
1 |
15808862 (1) |
| atp |
0.00 |
5 |
15808862 (2), 15525646 (1), 16227208 (1) |
| hydrogen |
0.00 |
4 |
15808862 (2), 18790640 (1), 15525646 (1) |
| calcium |
0.00 |
4 |
7704900 (1), 16403219 (1), 7594647 (1) |
About this table
|
Transcripts for PIM1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002648
Sigma-Aldrich siRNA and siRNA Panels for PIM1  Sigma-Aldrich shRNA Panels and shRNA for PIM1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002648 REFSEQ mRNAs for PIM1 gene: NM_002648.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002648               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002648                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002648                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002648  Additional cDNA sequence: AK301158.1 AK301314.1 AK309347.1 BC020224.1 CR591847.1 DQ022562.1 M16750.1 M24779.1 M54915.1 12 DOTS entries: DT.95170010 DT.99929343 DT.100776124 DT.121312366 DT.121312377 DT.100817023 DT.100817025 DT.100817029 DT.91762631 DT.92362239 DT.95190821 DT.121312383 24/238 AceView cDNA sequences (see all 238
):D57905 AA812195 BQ183003 BM824680 BU739833 CA431420 BX483333 BM823689 AA844833 BU623403 AI133460 CN481625 AA411092 BM740943 T55957 BQ647774 AA928975 AU142969 CA306464 CR591847 AL528149 AL528148 AI376098 BM756311
highest scoring ESTs for PIM1:M16750 M54915 AA004462 AA005379 AA069282 AA115475 AA115609 AA232041 AA232339 AA292377 Unigene Cluster for PIM1: Pim-1 oncogene Hs.81170 [show with all ESTs]Unigene Representative Sequence: DQ022562
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for PIM1
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | ^ | 7 | ^ | 8a | · | 8b | · | 8c | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP5: | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for PIM1
2 Ensembl transcripts including schematic representations: ENST00000373509
ENST00000373507
|
Expression for PIM1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PIM1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PIM1
1 / 2 / 3 4 probe-sets matching PIM1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GTAGTATACA
SOURCE GeneReport for Unigene cluster: Hs.81170
Expression variation in blood from EXPOLDB for PIM1 UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309Tissue specificity: Expressed primarily in cells of the hematopoietic and germline lineages. Isoform 1 and isoform 2 are both expressed in prostate cancer cell lines |
Orthologs for PIM1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PIM1 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for PIM1
ENSEMBL Gene Tree for PIM1 | Paralogs for PIM1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PIM1 gene
- PIM22 PIM32 PASK2
|
SNPs/Variants for PIM1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PIM1 (up to first 250kb)
|
Disorders & Mutations for PIM1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 164960
10/17 Novoseek disease relationships for PIM1 gene (see all 17
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leukemogenesis |
64.48 |
1 |
11237709 (1) |
| lymphoma |
40.62 |
11 |
9867250 (1), 16403219 (1), 8847898 (1), 15798097 (1) (see all 8) |
| prostate cancer |
38.56 |
26 |
13679438 (3), 16186805 (3), 14981536 (3), 17908456 (2) (see all 11) |
| primary central nervous system lymphoma |
34.80 |
1 |
16418334 (1) |
| leukemia |
33.27 |
2 |
11368509 (1), 15498859 (1) |
| prostatic intraepithelial neoplasia |
32.69 |
3 |
15264249 (2), 16505280 (1) |
| lymphoma b-cell |
25.65 |
2 |
16418334 (1) |
| myeloid leukemia |
18.83 |
1 |
1314369 (1) |
| cancer |
16.41 |
16 |
15264249 (2), 18708761 (2), 16403219 (1), 15067357 (1) (see all 9) |
| tumors |
16.22 |
25 |
18695914 (3), 16123140 (2), 15799824 (1), 18181176 (1) (see all 15) |
About this table
1 PharmGKB disease relationship for PIM1 geneAbout this table
Human Genome Epidemiology Navigator: PIM1 (5 documents) Tumor Gene Database: PIM1
|
Medical News for PIM1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for PIM1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/175 PubMed articles for PIM1 gene (see all 175
):- Pim-1 protein kinase is nuclear in Burkitt's lymphoma: nuclear localization is necessary for its biologic effects. (PubMed id 12680209)1, 3, 4 Ionov Y.... Kraft A.S. (2003)
- Identification of heterochromatin protein 1 (HP1) as a phosphorylation target by Pim-1 kinase and the effect of phosphorylation on the transcriptional repression function of HP1. (PubMed id 10664448)1, 3, 4 Koike N.... Iguchi-Ariga S.M.M. (2000)
- Primary structure of the putative human oncogene, pim-1. (PubMed id 2205533)1, 3, 4 Reeves R.... Power M. (1990)
- The 44 kDa Pim-1 kinase directly interacts with tyrosine kinase Etk/BMX and protects human prostate cancer cells from apoptosis induced by chemotherapeutic drugs. (PubMed id 16186805)1, 3, 4 Xie Y.... Qiu Y. (2006)
- IL-5 and granulocyte-macrophage colony-stimulating factor activate STAT3 and STAT5 and promote Pim-1 and cyclin D3 protein expression in human eosinophils. (PubMed id 15528381)1, 3, 4 Stout B.A.... Bertics P.J. (2004)
- The pim-1 oncogene encodes two related protein-serine/threonine kinases by alternative initiation at AUG and CUG. (PubMed id 1825810)1, 3, 4 Saris C.J.... Berns A. (1991)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Hypermutation of multiple proto-oncogenes in B-cell diffuse large- cell lymphomas. (PubMed id 11460166)3, 4 Pasqualucci L.... Dalla-Favera R. (2001)
- Identification of the human pim-1 gene product as a 33-kilodalton cytoplasmic protein with tyrosine kinase activity. (PubMed id 2837645)3, 4 Telerman A.... Givol D. (1988)
- Comparison of the human and mouse PIM-1 cDNAs: nucleotide sequence and immunological identification of the in vitro synthesized PIM-1 protein. (PubMed id 3329709)3, 4 Domen J....Berns A. (1987)
|
Search for PIM1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PIM1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PIM1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PIM1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for PIM1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for PIM1:

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| Antibodies & Assays for PIM1  (Pim-1) |
| | Recombinant Proteins (PIM1) | | Antibodies (PIM1) |
| | | Tocris compounds for PIM1 |
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Incremental update: 13 Oct 2009
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