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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PIM1 Gene

protein-coding   GIFtS: 70
GCID: GC06P037137

pim-1 oncogene


(Previous symbol: PIM)
 Explore 48 diseases affiliated with
PIM1 via our new
 Human Malady Compendium 
Biological research products
for PIM1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Pim-1 Oncogene1 2     Pim-1 Kinase 44 KDa Isoform2
PIM1 2     Pim-1 Oncogene (Proviral Integration Site 1)2
EC 2.7.11.13 8     Proto-Oncogene Serine/Threonine-Protein Kinase Pim-12
Oncogene PIM12     Serine/Threonine-Protein Kinase Pim-12

External Ids:    HGNC: 89861   Entrez Gene: 52922   Ensembl: ENSG000001371937   OMIM: 1649605   UniProtKB: P113093   

Export aliases for PIM1 gene to outside databases

Previous GC identifers: GC06P037140 GC06P037184 GC06P037245 GC06P036856


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PIM1:
The protein encoded by this gene belongs to the Ser/Thr protein kinase family, and PIM subfamily. This gene is
expressed primarily in B-lymphoid and myeloid cell lines, and is overexpressed in hematopoietic malignancies and in
prostate cancer. It plays a role in signal transduction in blood cells, contributing to both cell proliferation and
survival, and thus provides a selective advantage in tumorigenesis. Both the human and orthologous mouse genes have
been reported to encode two isoforms (with preferential cellular localization) resulting from the use of alternative
in-frame translation initiation codons, the upstream non-AUG (CUG) and downstream AUG codons (PMIDs:16186805,
1825810).(provided by RefSeq, Aug 2011)

UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309
Function: Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation and
thus providing a selective advantage in tumorigenesis. Exerts its oncogenic activity through: the regulation of MYC
transcriptional activity, the regulation of cell cycle progression and by phosphorylation and inhibition of
proapoptotic proteins (BAD, MAP3K5, FOXO3). Phosphorylation of MYC leads to an increase of MYC protein stability and
thereby an increase of transcriptional activity. The stabilization of MYC exerted by PIM1 might explain partly the
strong synergism between these two oncogenes in tumorigenesis. Mediates survival signaling through phosphorylation of
BAD, which induces release of the anti-apoptotic protein Bcl-X(L)/BCL2L1. Phosphorylation of MAP3K5, an other
proapoptotic protein, by PIM1, significantly decreases MAP3K5 kinase activity and inhibits MAP3K5-mediated
phosphorylation of JNK and JNK/p38MAPK subsequently reducing caspase-3 activation and cell apoptosis. Stimulates cell
cycle progression at the G1-S and G2-M transitions by phosphorylation of CDC25A and CDC25C. Phosphorylation of CDKN1A,
a regulator of cell cycle progression at G1, results in the relocation of CDKN1A to the cytoplasm and enhanced CDKN1A
protein stability. Promote cell cycle progression and tumorigenesis by down-regulating expression of a regulator of
cell cycle progression, CDKN1B, at both transcriptional and post-translational levels. Phosphorylation of
CDKN1B,induces 14-3-3-proteins binding, nuclear export and proteasome-dependent degradation. May affect the structure
or silencing of chromatin by phosphorylating HP1 gamma/CBX3. Acts also as a regulator of homing and migration of bone
marrow cells involving functional interaction with the CXCL12-CXCR4 signaling axis

summary for PIM1:
Pim kinases are constitutively active serine/threonine kinases that promote growth factor-independent
proliferation by phosphorylating, and thus inhibiting, a range of cellular proteins. Both Pim-1 and Pim-2
kinase are serine/threonine kinases that are involved in the control of cell growth, differentiation and
apoptosis. Pim-1 kinase is a serine/threonine kinase that is involved in the control of cell growth,
differentiation and apoptosis. It is expressed at high levels in the testes, prostate, oral epithelia,
hippocampus and hematopoietic tissues, and is expressed at low or undetectable levels in other tissues. In
the fetal liver and spleen, expression of Pim-1 kinase is high, but the protein is undetectable here in the
adult. Due to their constitutive activity, expression of Pim kinases is regulated at the level of
transcription, translation and degradation. Pim-1 kinase expression can be induced by a variety of
cytokines, mitogens and hormones, such as GM-CSF, interleukins, erythropoietin, IFN-? and prolactin. At the
transcriptional level, IL-2 can release the transcriptional attenuation of the Pim-1 kinase gene leading to
increased protein expression. Pim-2 kinase levels are linked to IL-3 availability. Eukaryotic translation
initiation factor 4E (eIF-4E) enhances Pim-1 kinase expression at the translational level and PP2A decreases
Pim-1 kinase levels. Pim-1 kinase autophoshorylation is thought to occur and the enzyme is stabilized by
interactions with Hsp90? and ?. In addition, the PI 3-K signaling pathway is involved in Pim-1 kinase
regulation and the JAK2/STAT5 pathway plays an important role in mediating cytokine and growth
factor-stimulated Pim-1 kinase expression. Both Pim-1 and Pim-2 kinase have been found to be overexpressed
or mutated in a variety of human tumors including B cell lymphomas, leukemias, prostate cancer and oral
cancer. Synergism between Pim kinases and the oncogenic Myc genes has been shown to contribute to
transformation by inhibiting apoptosis, and upregulation of Pim-1 and Pim-2 kinase is associated with cell
survival. Furthermore, dysregulation of the Pim-1 kinase gene alters differentiation and proliferation, and
enhances the transforming potential of its substrates such as Cdc25A. Pim-1 and Pim-3 also help maintain the
embryonic stem cell identity by supporting ESC self-renewal, and inhibiting differentiation and apoptosis.

Gene Wiki entry for PIM1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PIM1 gene promoter:
         SRF   Max1   C/EBPbeta   MAZR   AP-1   SRF (504 AA)   ATF-2   Lmo2   E47   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPIM1 promoter sequence
   Search SABiosciences Chromatin IP Primers for PIM1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PIM1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.2   Ensembl cytogenetic band:  6p21.2   HGNC cytogenetic band: 6p21

PIM1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PIM1 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06P037137:  view genomic region     (about GC identifiers)

Start:
37,137,922 bp from pter      End:
37,143,204 bp from pter
Size:
5,283 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309 (See protein sequence)
Recommended Name: Serine/threonine-protein kinase pim-1  
Size: 404 amino acids; 45412 Da
Cofactor: Magnesium
Subunit: Isoform 2 is isolated as a monomer whereas isoform 1 complexes with other proteins (By similarity). Binds to
RP9 (By similarity). Isoform 1, but not isoform 2, binds BMX. Isoform 2 interacts with CDKN1B and FOXO3. Interacts
with BAD. Interacts with PPP2CA; this interaction promotes dephosphorylation of PIM1, ubiquitination and proteasomal
degradation (By similarity). Interacts with HSP90, this interaction stabilizes PIM1 protein levels. Interacts
(ubiquitinated form) with HSP70 and promotes its proteosomal degradation. Interacts with CDKN1A. Interacts with
CDC25C. Interacts (via N-terminal 96 residues) with CDC25A (By similarity). Interacts with MAP3K5. Interacts with MYC
(By similarity)
Subcellular location: Isoform 2: Cytoplasm. Nucleus
Subcellular location: Isoform 1: Cell membrane
6/73 PDB 3D structures from and Proteopedia for PIM1 (see all 73):
1XQZ (3D)        1XR1 (3D)        1XWS (3D)        1YHS (3D)        1YI3 (3D)        1YI4 (3D)    
Secondary accessions: Q38RT9 Q5T7H7 Q96RG3
Alternative initiation: 2 isoforms:  P11309-1   P11309-2   (Initiates from CTG codon)

Explore the universe of human proteins at neXtProt for PIM1: NX_P11309

Post-translational modifications:

  • Autophosphorylated on both serine/threonine and tyrosine residues. Phosphorylated. Interaction with PPP2CA promotes
  • dephosphorylation1
  • Ubiquitinated, leading to proteasomal degradation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P11309

  • 4/10 DME Specific Peptides for PIM1 (P11309) (see all 10)
     GQVFFRQ  GGFGSVY  HRDIKDEN  DLFDFITE 

    PIM1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001230115.1  NP_002639.1  

    ENSEMBL proteins: 
     ENSP00000362608  

    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant PIM1 Protein
    R&D Systems Recombinant & Natural Proteins for PIM1
    Enzo Life Sciences proteins for PIM1
    OriGene Purified Protein: PIM1
    OriGene Protein Over-expression Lysate: PIM1
    OriGene Custom Protein Services for PIM1 
    GenScript Purified and Recombinant Proteins for PIM1
    Novus Biologicals PIM1 Proteins
    Novus Biologicals PIM1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for PIM1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005737cytoplasm IDA1825810
    GO:0005886plasma membrane IEA--


    PIM1 for ontologies           About GeneDecksing



    PIM1 Antibody Products: 
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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for PIM1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PIM1 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR000719 Prot_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry P11309

    ProtoNet protein and cluster: P11309

    UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309
    Similarity: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309
    Function: Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation and
    thus providing a selective advantage in tumorigenesis. Exerts its oncogenic activity through: the regulation of MYC
    transcriptional activity, the regulation of cell cycle progression and by phosphorylation and inhibition of
    proapoptotic proteins (BAD, MAP3K5, FOXO3). Phosphorylation of MYC leads to an increase of MYC protein stability and
    thereby an increase of transcriptional activity. The stabilization of MYC exerted by PIM1 might explain partly the
    strong synergism between these two oncogenes in tumorigenesis. Mediates survival signaling through phosphorylation of
    BAD, which induces release of the anti-apoptotic protein Bcl-X(L)/BCL2L1. Phosphorylation of MAP3K5, an other
    proapoptotic protein, by PIM1, significantly decreases MAP3K5 kinase activity and inhibits MAP3K5-mediated
    phosphorylation of JNK and JNK/p38MAPK subsequently reducing caspase-3 activation and cell apoptosis. Stimulates cell
    cycle progression at the G1-S and G2-M transitions by phosphorylation of CDC25A and CDC25C. Phosphorylation of CDKN1A,
    a regulator of cell cycle progression at G1, results in the relocation of CDKN1A to the cytoplasm and enhanced CDKN1A
    protein stability. Promote cell cycle progression and tumorigenesis by down-regulating expression of a regulator of
    cell cycle progression, CDKN1B, at both transcriptional and post-translational levels. Phosphorylation of
    CDKN1B,induces 14-3-3-proteins binding, nuclear export and proteasome-dependent degradation. May affect the structure
    or silencing of chromatin by phosphorylating HP1 gamma/CBX3. Acts also as a regulator of homing and migration of bone
    marrow cells involving functional interaction with the CXCL12-CXCR4 signaling axis
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Induction: Strongly induced in leukocytes by the JAK/STAT pathway in response to cytokines. Induced by different
    cellular stresses, heat shock and cytotoxic agents

         Genatlas biochemistry entry for PIM1:
    pim-1 oncogene

    Enzyme Number (IUBMB): EC 2.7.11.11 2

    miRNA
    Products:
        
    miRTarBase miRNAs that target PIM1:
    hsa-mir-210 (MIRT000151), hsa-mir-1 (MIRT004322), hsa-mir-192 (MIRT004857)

    OriGene 3'-UTR Clone: PIM1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PIM1
    8/66 QIAGEN miScript miRNA Assays for microRNAs that regulate PIM1 (see all 66):
    hsa-miR-15a hsa-miR-877* hsa-miR-629* hsa-miR-208b hsa-miR-3613-3p hsa-miR-2113 hsa-miR-3612 hsa-miR-761
    SwitchGear 3'UTR luciferase reporter plasmidPIM1 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PIM1 (see all 7)
    OriGene shRNA RFP: PIM1
    OriGene siRNA: PIM1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PIM1

    Gene Editing
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    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PIM1 (see all 3)
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    Sino Biological Human cDNA Clone for PIM1
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PIM1 

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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PIM1

    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004674protein serine/threonine kinase activity IDA18593906
    GO:0005515protein binding IPI18056989
    GO:0005524ATP binding IDA1825810
    GO:0008134transcription factor binding IPI18593906
    GO:0030145manganese ion binding IDA1825810


    PIM1 for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for PIM1:
     Actin fiber cells  Decreased 12E8 tau but not tot  Decreased substrate adherent c  Upregulation of Wnt/beta-caten 

    Animal Models:
         Mouse knock-out Pim1tm1Pwl for PIM1
         4 MGI mutant phenotypes (inferred from 1 allele(MGI details for Pim1):
     cellular  growth/size  hematopoietic system  immune system 

    PIM1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/12 super-pathways (see all 12About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Development_EPO-induced Jak-STAT pathway
    Development EPO-induced Jak-STAT pathway1.00
    Development_EPO-induced Jak-STAT pathway1.00
    2PEDF Induced Signaling
    IL-6 Pathway0.61
    STAT3 Pathway0.47
    3Immune response_IL-2 activation and signaling pathway
    Immune response IL-3 activation and signaling pathway0.41
    Immune response_IL-3 activation and signaling pathway0.41
    4Lymphocyte Signaling
    Lymphocyte Signaling1.00
    5Apoptosis and Autophagy
    Apoptosis and Autophagy1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for PIM1
        Development EPO-induced Jak-STAT pathway
    Immune response IL-3 activation and signaling pathway

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PIM1
        STAT3 Pathway
    IL-10 Pathway
    IL-6 Pathway

    2 Cell Signaling Technology (CST) Pathways for PIM1
        Apoptosis and Autophagy
    Lymphocyte Signaling

    2 GeneGo (Thomson Reuters) Pathways for PIM1
        Immune response IL-3 activation and signaling pathway
    Development EPO-induced Jak-STAT pathway

    4 BioSystems Pathways for PIM1 
        IL-5 Signaling Pathway
    Role of Calcineurin-dependent NFAT signaling in lymphocytes
    Validated targets of C-MYC transcriptional activation
    C-MYB transcription factor network


    2         Kegg Pathways  (Kegg details for PIM1):
        Jak-STAT signaling pathway
    Acute myeloid leukemia


    PIM1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PIM1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/41 Interacting proteins for PIM1 (P113091, 2, 3 ENSP000003626084) via UniProtKB, MINT, STRING, and/or I2D (see all 41)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    MDM2Q009872, 3, ENSP000004172814MINT-6823555 I2D: score=1 STRING: ENSP00000417281
    BMXP518131, 2, 3, ENSP000003087744EBI-696621,EBI-696657 MINT-68562 MINT-68561 MINT-68560 MINT-68563 I2D: score=2 STRING: ENSP00000308774
    HIST2H3CQ71DI33, ENSP000003581544I2D: score=1 STRING: ENSP00000358154
    HIST2H3AQ71DI33I2D: score=1 
    HIST2H3DQ71DI33I2D: score=1 
    About this table

    Gene Ontology (GO): 5/9 biological process terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468protein phosphorylation IDA18593906
    GO:0006915apoptotic process IEA--
    GO:0007049cell cycle IEA--
    GO:0007275multicellular organismal development TAS2682662
    GO:0008283cell proliferation IDA16186805


    PIM1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PIM1 for compounds           About GeneDecksing

    EMD Millipore small molecules for PIM1:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for PIM1 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    PIM-1 Inhibitor 2Pim-1 kinase inhibitor[477845-12-8]
    TCS PIM-1 1 Selective, ATP-competitive Pim-1 kinase inhibitor --
    TCS PIM-1 4a Selective, ATP-competitive Pim kinase inhibitor [438190-29-5]

    3 HMDB Compounds for PIM1    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    Manganesemanganese 7439-96-5--

    10/21 DrugBank Compounds for PIM1 (see all 21)    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    (3e)-3-[(4-Hydroxyphenyl)Imino]-1h-Indol-2(3h)-One-- --target--17139284 17016423 10592235
    2-(4-Morpholinyl)-8-Phenyl-4h-1-Benzopyran-4-One-- 154447-36-6target--17139284 17016423 10592235
    3,4-Dihydroxy-1-Methylquinolin-2(1h)-One-- --target--17139284 17016423 10592235
    Rbt205 Inhibitor-- --target--17139284 17016423 10592235
    Adenosine monophosphate5'-Adenosine monophosphate (see all 15)61-19-8targetproduct of17139284 17016423
    Phosphoaminophosphonic Acid-Adenylate Ester-- --target--17139284 17016423
    Phosphonoserine-- --target--17139284 17016423
    S,S-(2-Hydroxyethyl)Thiocysteine-- --target--17139284 17016423
    Staurosporine-- 62996-74-1target--17139284 17016423
    (2S)-1,3-benzothiazol-2-yl{2-[(2-pyridin-3-ylethyl)amino]pyrimidin-4-yl}ethanenitrile-- --target--10592235

    10/13 Novoseek chemical compound relationships for PIM1 gene (see all 13)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    threonine 78 44 1713213 (4), 9099695 (2), 19687226 (2), 11591366 (2) (see all 35)
    serine 67.6 46 1713213 (4), 10664448 (3), 9099695 (2), 11591366 (2) (see all 33)
    tyrosine 46.4 16 7527668 (3), 14764533 (1), 1713213 (1), 9099695 (1) (see all 12)
    amp-pnp 46 4 15808862 (2), 16227208 (1)
    gp 130 38.1 3 10626893 (2), 18292512 (1)
    geldanamycin 35 3 15798097 (1), 11237709 (1)
    rapamycin 21.2 1 16123140 (1)
    ionomycin 11.1 6 7704900 (4), 9419425 (1)
    proline 8.63 1 15808862 (1)
    atp 0 5 15808862 (2), 15525646 (1), 16227208 (1)

    Search CenterWatch for drugs/clinical trials and news about PIM1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PIM1 gene (2 alternative transcripts): 
    NM_001243186.1  NM_002648.3  

    Unigene Cluster for PIM1:

    Pim-1 oncogene
    Hs.81170  [show with all ESTs]
    Unigene Representative Sequence: DQ022562
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000373509(uc003onk.3 uc011dtw.2) ENST00000468243 ENST00000479509
    ENST00000488617

    miRNA
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    Additional cDNA sequence: 

    AK301158.1 AK301314.1 AK309347.1 BC020224.1 DQ022562.1 M16750.1 M24779.1 M54915.1 

    12 DOTS entries:

    DT.95170010  DT.99929343  DT.100776124  DT.100817023  DT.121312366  DT.121312377  DT.100817025  DT.100817029 
    DT.92362239  DT.95190821  DT.121312383  DT.91762631 

    24/238 AceView cDNA sequences (see all 238):

    BQ183003 BU739833 BM756311 CA431420 D57905 CA443845 BM824680 CN481625 
    BQ647774 AI273750 AL528148 AI133460 T55957 CA306464 AI126985 AA345190 
    BE302402 CR591847 AW949330 AI376098 BM823689 AA812195 BM740943 AL528149 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for PIM1    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b · 8c
    SP1:                                            -     -     -                           
    SP2:                                -                                                   
    SP3:                                                                                    
    SP4:                                                        -                           
    SP5:        -     -                                                                     


    ECgene alternative splicing isoforms for PIM1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PIM1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTAGTATACA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    PIM1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ mesenchymal progenitor 7PEND24 (Embryonic Progenitor Cell)Cartilage, Neural Crest
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See PIM1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PIM1

    SOURCE GeneReport for Unigene cluster: Hs.81170

    UniProtKB/Swiss-Prot: PIM1_HUMAN, P11309
    Tissue specificity: Expressed primarily in cells of the hematopoietic and germline lineages. Isoform 1 and isoform 2
    are both expressed in prostate cancer cell lines

        SABiosciences Expression via Pathway-Focused PCR Arrays including PIM1: 
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              Synaptic Plasticity in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PIM1 gene from 5/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves LOC1008588381 serine/threonine-protein kinase pim-1-like 78.61(n)
    83.39(a)
      100858838  XM_003642712.1  XP_003642760.1 
    lizard
    (Anolis carolinensis)
    Reptilia PIM16
    --
    85(a)
    1 ↔ 1
    GL343382.1(247834-252195)
    African clawed frog
    (Xenopus laevis)
    Amphibia pim1-A-prov2 pim-1 oncogene 75.85(n)    L29495.1 
    zebrafish
    (Danio rerio)
    Actinopterygii pim12 pim-1 oncogene 75.91(n)   58054  BC045836.1 
    worm
    (Caenorhabditis elegans)
    Secernentea prk-21 , 3 serine/threonine kinase3
    Protein PRK-21
    45(a)
    (best of 2)3
    52.38(n)1
    46.33(a)1
      III(3436824-3438531)3
    1754371  NM_065295.41  NP_497696.21 


    ENSEMBL Gene Tree for PIM1 (if available)
    TreeFam Gene Tree for PIM1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PIM1 gene
    PIM22  PIM32  PASK2  
    2 SIMAP similar genes for PIM1 using alignment to 1 protein entry:     PIM1_HUMAN:
    PIM3    PIM2

    PIM1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/137 NCBI SNPs in PIM1 are shown (see all 137    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs789270141,2
    F,--37135963(+) CAATTG/ATTTCC 2 -- us2k12Minor allele frequency- A:0.09WA EA 238
    rs360920471,2
    C,F,H,--37136100(+) TCTGTT/CTGACT 2 -- us2k111Minor allele frequency- C:0.02MN NS NA 1284
    rs1816989781,2
    --37136186(+) TGTTCA/GGTGCC 2 -- us2k10--------
    rs1451423691,2
    --37136231(+) TTGAAC/TACTCA 2 -- us2k10--------
    rs1390120861,2
    --37136284(+) TATGAC/TCCTGT 2 -- us2k10--------
    rs94705101,2
    C,F,--37136297(+) CATCCT/AATTTA 2 -- us2k1 tfbs35Minor allele frequency- A:0.01MN 408
    rs1854176761,2
    --37136384(+) AGTTCC/GGCCAC 2 -- us2k10--------
    rs1884564821,2
    --37136432(+) GGATAA/CATTCA 2 -- us2k10--------
    rs1812664361,2
    --37136446(+) AAGTTA/GTGGAG 2 -- us2k10--------
    rs1388580841,2
    --37136820(+) GTAAT-/AACAGGCT 2 -- us2k10--------

    HapMap Linkage Disequilibrium report for PIM1 (37137922 - 37143204 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for PIM1: --

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PIM1 for disorders           About GeneDecksing

    OMIM gene information: 164960    OMIM disorders: --

    20/48 diseases for PIM1 (see all 48):    About MalaCards
    b-cell lymphomas    prostate cancer    marginal zone b-cell lymphoma    prostatitis
    alpha 1-antitrypsin deficiency    central nervous system lymphoma    diamond-blackfan anemia    diffuse large b-cell lymphoma
    leukemia    oral cancer    non-hodgkin lymphoma    squamous cell carcinoma
    monocytic leukemia    laryngeal squamous cell carcinoma    acute monocytic leukemia    oral squamous cell carcinoma
    mantle cell lymphoma    esophageal squamous cell carcinoma    myeloid leukemia    hodgkin's lymphoma

    10/17 Novoseek disease relationships for PIM1 gene (see all 17)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    leukemogenesis 65.1 4 19687226 (2), 11237709 (1)
    prostate cancer 44.2 36 20215828 (6), 13679438 (3), 16186805 (3), 14981536 (3) (see all 14)
    leukemia 40.8 8 19703513 (5), 11368509 (1), 15498859 (1)
    lymphoma 38.5 11 9867250 (1), 16403219 (1), 8847898 (1), 15798097 (1) (see all 8)
    primary central nervous system lymphoma 32.7 1 16418334 (1)
    prostatic intraepithelial neoplasia 30.6 3 15264249 (2), 16505280 (1)
    solid tumor 29.3 6 19483729 (3), 14978971 (1)
    cancer 25.6 26 19568408 (3), 15264249 (2), 18708761 (2), 16403219 (1) (see all 12)
    tumors 24.8 33 18695914 (3), 20215828 (2), 16123140 (2), 15799824 (1) (see all 21)
    lymphoma b-cell 22.6 2 16418334 (1)

    Human Genome Epidemiology (HuGE) Navigator: PIM1 (16 documents)
    Tumor Gene Database (TGDB): PIM1

    Export disorders for PIM1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PIM1 gene, integrated from 9 sources (see all 244):
    (articles sorted by number of sources associating them with PIM1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma. (PubMed id 15808862)1, 2, 9 Kumar A....Bremer R. (2005)
    2. Pim-1 protein kinase is nuclear in Burkitt's lymphoma: nuclear localization is necessary for its biologic effects. (PubMed id 12680209)1, 2, 9 Ionov Y.... Kraft A.S. (2003)
    3. Phosphorylation of the cell cycle inhibitor p21Cip1/WAF1 by Pim-1 kinase. (PubMed id 12431783)1, 2, 9 Wang Z....Magnuson N.S. (2002)
    4. Identification of heterochromatin protein 1 (HP1) as a phosphorylation target by Pim-1 kinase and the effect of phosphorylation on the transcriptional repression function of HP1. (PubMed id 10664448)1, 2, 9 Koike N.... Iguchi-Ariga S.M.M. (2000)
    5. Pim-1 kinase stability is regulated by heat shock proteins and the ubiquitin-proteasome pathway. (PubMed id 15798097)1, 2, 9 Shay K.P....Magnuson N.S. (2005)
    6. Primary structure of the putative human oncogene, pim-1. (PubMed id 2205533)1, 2, 9 Reeves R.... Power M. (1990)
    7. The 44 kDa Pim-1 kinase directly interacts with tyrosine kinase Etk/BMX and protects human prostate cancer cells from apoptosis induced by chemotherapeutic drugs. (PubMed id 16186805)1, 2, 9 Xie Y.... Qiu Y. (2006)
    8. The oncogenic serine/threonine kinase Pim-1 directly phosphorylates and activates the G2/M specific phosphatase Cdc25C. (PubMed id 16356754)1, 2, 9 Bachmann M....Moroy T. (2006)
    9. IL-5 and granulocyte-macrophage colony-stimulating factor activate STAT3 and STAT5 and promote Pim-1 and cyclin D3 protein expression in human eosinophils. (PubMed id 15528381)1, 2, 9 Stout B.A.... Bertics P.J. (2004)
    10. Pim kinases promote cell cycle progression by phosphorylating and down-regulating p27Kip1 at the transcriptional and posttranscriptional levels. (PubMed id 18593906)1, 2, 9 Morishita D.... Fujita N. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5292 HGNC: 8986 AceView: PIM1 Ensembl:ENSG00000137193 euGenes: HUgn5292
    ECgene: PIM1 Kegg: 5292 H-InvDB: PIM1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PIM1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for PIM1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PIM1 gene:
    Search GeneIP for patents involving PIM1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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