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Aliases for PIK3CD-AS1 Gene

Subcategory (RNA class) for PIK3CD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for PIK3CD-AS1 Gene

  • PIK3CD Antisense RNA 1 2 3 4 5
  • C1orf200 3 4
  • Chromosome 1 Open Reading Frame 200 2
  • PIK3CD Antisense Gene Protein 1 4

External Ids for PIK3CD-AS1 Gene

Previous HGNC Symbols for PIK3CD-AS1 Gene

  • C1orf200

Summaries for PIK3CD-AS1 Gene

GeneCards Summary for PIK3CD-AS1 Gene

PIK3CD-AS1 (PIK3CD Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PIK3CD-AS1 Gene

Genomics for PIK3CD-AS1 Gene

Regulatory Elements for PIK3CD-AS1 Gene

Enhancers for PIK3CD-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G009657 1.6 Ensembl ENCODE dbSUPER 0.7 -3.3 -3347 1.8 HDGF PKNOX1 CREB3L1 MLX ARNT ARID4B DMAP1 FEZF1 SLC30A9 ZNF766 CTNNBIP1 PIK3CD-AS1 RPL26P7
GH01G009660 1.5 Ensembl ENCODE dbSUPER 0.7 -4.8 -4816 0.4 ATF1 PKNOX1 CREB3L1 ARID4B GLIS2 FOS ZNF548 CAVIN1 ZHX2 KAT8 CTNNBIP1 PIK3CD-AS1 RPL26P7
GH01G009662 1.3 ENCODE dbSUPER 0.7 -4.5 -4509 0.1 ATF1 PKNOX1 CREB3L1 GLIS2 ZNF766 CBX5 FOS ZNF548 ZHX2 KAT8 CTNNBIP1 RPL26P7 PIK3CD-AS1
GH01G009643 1.4 Ensembl ENCODE dbSUPER 0.4 +9.9 9938 2.1 ZFP64 ZEB1 ZNF121 EGR1 ZNF354C EGR2 ZNF202 ZNF680 CEBPB ZNF426 ENSG00000223989 LINC01759 CTNNBIP1 PIK3CD-AS1 PIK3CD
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PIK3CD-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for PIK3CD-AS1 Gene

9,652,610 bp from pter
9,654,586 bp from pter
1,977 bases
Minus strand

Genomic View for PIK3CD-AS1 Gene

Genes around PIK3CD-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIK3CD-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIK3CD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIK3CD-AS1 Gene

Proteins for PIK3CD-AS1 Gene

  • Protein details for PIK3CD-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein PIK3CD-AS1
    Protein Accession:
    Secondary Accessions:
    • Q8N853

    Protein attributes for PIK3CD-AS1 Gene

    167 amino acids
    Molecular mass:
    18168 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PIK3CD-AS1 Gene

Post-translational modifications for PIK3CD-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for PIK3CD-AS1 Gene

Domains & Families for PIK3CD-AS1 Gene

Protein Domains for PIK3CD-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PIK3CD-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIK3CD-AS1 Gene

Function for PIK3CD-AS1 Gene

Phenotypes for PIK3CD-AS1 Gene

GenomeRNAi human phenotypes for PIK3CD-AS1:
genes like me logo Genes that share phenotypes with PIK3CD-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIK3CD-AS1 Gene

Localization for PIK3CD-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for PIK3CD-AS1 gene
Compartment Confidence
extracellular 2
nucleus 1
cytosol 1
golgi apparatus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for PIK3CD-AS1 Gene

Pathways & Interactions for PIK3CD-AS1 Gene

SuperPathways for PIK3CD-AS1 Gene

No Data Available

Interacting Proteins for PIK3CD-AS1 Gene

Gene Ontology (GO) - Biological Process for PIK3CD-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIK3CD-AS1 Gene

Drugs & Compounds for PIK3CD-AS1 Gene

No Compound Related Data Available

Transcripts for PIK3CD-AS1 Gene

mRNA/cDNA for PIK3CD-AS1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIK3CD-AS1 Gene

No ASD Table

Relevant External Links for PIK3CD-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for PIK3CD-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PIK3CD-AS1 Gene

Protein differential expression in normal tissues from HIPED for PIK3CD-AS1 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for PIK3CD-AS1 Gene

Protein tissue co-expression partners for PIK3CD-AS1 Gene

- Elite partner
genes like me logo Genes that share expression patterns with PIK3CD-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIK3CD-AS1 Gene

Orthologs for PIK3CD-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for PIK3CD-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C1orf200 35
  • 96 (a)
Species where no ortholog for PIK3CD-AS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for PIK3CD-AS1 Gene

Gene Tree for PIK3CD-AS1 (if available)
Gene Tree for PIK3CD-AS1 (if available)

Paralogs for PIK3CD-AS1 Gene

No data available for Paralogs for PIK3CD-AS1 Gene

Variants for PIK3CD-AS1 Gene

Sequence variations from dbSNP and Humsavar for PIK3CD-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1001075479 -- 9,655,181(+) AGCAG(C/T)ACCCC intron-variant, upstream-variant-2KB
rs1001101408 -- 9,654,763(+) ACCTT(A/C)AGAAG intron-variant, upstream-variant-2KB
rs1001441756 -- 9,652,655(+) GGCTT(C/T)CTCAT intron-variant, nc-transcript-variant
rs1002649600 -- 9,654,383(+) AGATC(A/C)CACGG intron-variant, nc-transcript-variant
rs1003033467 -- 9,655,390(+) AATCA(C/T)AGCAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for PIK3CD-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv508847 CNV insertion 20534489

Variation tolerance for PIK3CD-AS1 Gene

Gene Damage Index Score: 1.80; 33.99% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for PIK3CD-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PIK3CD-AS1 Gene

Disorders for PIK3CD-AS1 Gene

Relevant External Links for PIK3CD-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for PIK3CD-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PIK3CD-AS1 Gene

Publications for PIK3CD-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for PIK3CD-AS1 Gene

Sources for PIK3CD-AS1 Gene

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