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Aliases for PIK3CD-AS1 Gene

Subcategory (RNA class) for PIK3CD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for PIK3CD-AS1 Gene

  • PIK3CD Antisense RNA 1 2 3 4
  • C1orf200 3 4
  • Chromosome 1 Open Reading Frame 200 2
  • PIK3CD Antisense Gene Protein 1 4

External Ids for PIK3CD-AS1 Gene

Previous Symbols for PIK3CD-AS1 Gene

  • C1orf200

Summaries for PIK3CD-AS1 Gene

GeneCards Summary for PIK3CD-AS1 Gene

PIK3CD-AS1 (PIK3CD Antisense RNA 1) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PIK3CD-AS1 Gene

Genomics for PIK3CD-AS1 Gene

Genomic Location for PIK3CD-AS1 Gene

Start:
9,652,610 bp from pter
End:
9,654,586 bp from pter
Size:
1,977 bases
Orientation:
Minus strand

Genomic View for PIK3CD-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PIK3CD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIK3CD-AS1 Gene

No data available for Regulatory Elements for PIK3CD-AS1 Gene

Proteins for PIK3CD-AS1 Gene

  • Protein details for PIK3CD-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5SR53-CA200_HUMAN
    Recommended name:
    Putative uncharacterized protein PIK3CD-AS1
    Protein Accession:
    Q5SR53
    Secondary Accessions:
    • Q8N853

    Protein attributes for PIK3CD-AS1 Gene

    Size:
    167 amino acids
    Molecular mass:
    18168 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PIK3CD-AS1 Gene

Proteomics data for PIK3CD-AS1 Gene at MOPED

Post-translational modifications for PIK3CD-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIK3CD-AS1 Gene

Domains for PIK3CD-AS1 Gene

Protein Domains for PIK3CD-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with PIK3CD-AS1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for PIK3CD-AS1 Gene

Function for PIK3CD-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PIK3CD-AS1 Gene

Localization for PIK3CD-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for PIK3CD-AS1 Gene

Pathways for PIK3CD-AS1 Gene

SuperPathways for PIK3CD-AS1 Gene

No Data Available

Interacting Proteins for PIK3CD-AS1 Gene

Gene Ontology (GO) - Biological Process for PIK3CD-AS1 Gene

None

No data available for Pathways by source for PIK3CD-AS1 Gene

Transcripts for PIK3CD-AS1 Gene

mRNA/cDNA for PIK3CD-AS1 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PIK3CD-AS1 Gene

No ASD Table

Relevant External Links for PIK3CD-AS1 Gene

GeneLoc Exon Structure for
PIK3CD-AS1
ECgene alternative splicing isoforms for
PIK3CD-AS1

Expression for PIK3CD-AS1 Gene

mRNA expression in normal human tissues for PIK3CD-AS1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for PIK3CD-AS1 Gene

genes like me logo Genes that share expressions with PIK3CD-AS1: view

Orthologs for PIK3CD-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for PIK3CD-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1orf200 37
  • 96 (a)
OneToOne
Species with no ortholog for PIK3CD-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for PIK3CD-AS1 Gene

ENSEMBL:
Gene Tree for PIK3CD-AS1 (if available)
TreeFam:
Gene Tree for PIK3CD-AS1 (if available)

Paralogs for PIK3CD-AS1 Gene

No data available for Paralogs for PIK3CD-AS1 Gene

Variants for PIK3CD-AS1 Gene

Relevant External Links for PIK3CD-AS1 Gene

HapMap Linkage Disequilibrium report
PIK3CD-AS1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for PIK3CD-AS1 Gene

Disorders for PIK3CD-AS1 Gene

No disorders were found for PIK3CD-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for PIK3CD-AS1 Gene

Publications for PIK3CD-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for PIK3CD-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate PIK3CD-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for PIK3CD-AS1
    • Block miRNA regulation of PIK3CD-AS1 using miScript Target Protectors

    Sources for PIK3CD-AS1 Gene

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