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PIGT Gene(Protein Coding)

Phosphatidylinositol Glycan Anchor Biosynthesis Class T

GCID:
GC20P045416
GIFtS:
50
Genes Participants
UDN Logo

Aliases for PIGT Gene

Aliases for PIGT Gene

  • Phosphatidylinositol Glycan Anchor Biosynthesis Class T 2 3 5
  • Phosphatidylinositol-Glycan Biosynthesis Class T Protein 3 4
  • GPI Transamidase Subunit 2 3
  • Neurotrophin-Regulated Neuronal Development-Associated Protein 3
  • Phosphatidylinositol Glycan, Class T 2
  • GPI Transamidase Component PIG-T 3
  • CGI-06 3
  • MCAHS3 3
  • NDAP 3
  • PNH2 3

External Ids for PIGT Gene

Previous GeneCards Identifiers for PIGT Gene

  • GC20P043773
  • GC20P044683
  • GC20P044730
  • GC20P043478
  • GC20P044044
  • GC20P040786

Summaries for PIGT Gene

Entrez Gene Summary for PIGT Gene

  • This gene encodes a protein that is involved in glycosylphosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is a glycolipid found on many blood cells and serves to anchor proteins to the cell surface. This protein is an essential component of the multisubunit enzyme, GPI transamidase. GPI transamidase mediates GPI anchoring in the endoplasmic reticulum, by catalyzing the transfer of fully assembled GPI units to proteins. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, May 2012]

GeneCards Summary for PIGT Gene

PIGT (Phosphatidylinositol Glycan Anchor Biosynthesis Class T) is a Protein Coding gene. Diseases associated with PIGT include Multiple Congenital Anomalies-Hypotonia-Seizures Syndrome 3 and Paroxysmal Nocturnal Hemoglobinuria 2. Among its related pathways are Metabolism of proteins and Glycosylphosphatidylinositol (GPI)-anchor biosynthesis. Gene Ontology (GO) annotations related to this gene include GPI-anchor transamidase activity.

UniProtKB/Swiss-Prot for PIGT Gene

  • Component of the GPI transamidase complex. Essential for transfer of GPI to proteins, particularly for formation of carbonyl intermediates.

Gene Wiki entry for PIGT Gene

Additional gene information for PIGT Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PIGT Gene

Genomics for PIGT Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for PIGT Gene

Promoters and enhancers for PIGT Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20I045415 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.2 187 1.9 PKNOX1 CLOCK FOXA2 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 PIGT DBNDD2 TP53TG5 SYS1 RPS2P7 MIR6812
GH20I045334 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.6 -74.0 -73987 14.4 CLOCK MLX ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 GLIS1 SDC4 NCOA5 PCIF1 ZNF335 ZSWIM1 CD40 SPATA25 ENSG00000271984 SNX21 DBNDD2
GH20I045967 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 9.8 +554.8 554807 5.8 CLOCK ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF335 NCOA5 SLC35C2 TP53RK ZNF334 PCIF1 ZNF663P CD40 ENSG00000271984 SPATA25
GH20I044475 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.8 -939.7 -939730 2.5 HDGF PKNOX1 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 TTPAL SYS1 PIGT PKIG GC20P044473 PIR42438
GH20I045372 Enhancer 1.4 FANTOM5 Ensembl ENCODE 12.1 -42.5 -42461 2 PKNOX1 SMAD1 ARID4B SIN3A ZNF2 POLR2B E2F8 ZNF143 DEK SP5 DBNDD2 TP53TG5 PIGT SYS1 KCNS1 WFDC11 SYS1-DBNDD2 NDUFB4P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIGT on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the PIGT gene promoter:

Genomic Locations for PIGT Gene

Genomic Locations for PIGT Gene
chr20:45,416,067-45,456,934
(GRCh38/hg38)
Size:
40,868 bases
Orientation:
Plus strand
chr20:44,044,707-44,054,884
(GRCh37/hg19)

Genomic View for PIGT Gene

Genes around PIGT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIGT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIGT Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PIGT Gene

Proteins for PIGT Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for PIGT Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q969N2-PIGT_HUMAN
    Recommended name:
    GPI transamidase component PIG-T
    Protein Accession:
    Q969N2
    Secondary Accessions:
    • B2RND5
    • B7Z3N1
    • B7Z7I8
    • E1P622
    • G8JLF5
    • Q2NL69
    • Q7Z3N7
    • Q9BQY7
    • Q9BQY8
    • Q9UJG6
    • Q9Y2Z5

    Protein attributes for PIGT Gene

    Size:
    578 amino acids
    Molecular mass:
    65700 Da
    Quaternary structure:
    • Forms a complex with PIGK/GPI8, PIGS, PIGU and GPAA1/GAA1. Has a critical role in maintaining the complex by stabilizing the expression of GPAA1 and GPI8 and linking them to PIGS.
    SequenceCaution:
    • Sequence=AAD27715.1; Type=Frameshift; Positions=5, 27; Evidence={ECO:0000305}; Sequence=AAQ88951.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAB57341.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for PIGT Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for PIGT Gene

Protein Expression for PIGT Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for PIGT Gene

  • The disulfide bond between PIGK/GPI8 and PIGT is important for normal enzyme activity.
  • Ubiquitination at Lys337, isoforms=2, 4, 5339, and Lys365
  • Glycosylation at Asn164, isoforms=2, 3, 4, 5, 6291, and Asn327

Other Protein References for PIGT Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for PIGT Gene

Domains & Families for PIGT Gene

Gene Families for PIGT Gene

HGNC:
Human Protein Atlas (HPA):
  • Disease related genes
  • Plasma proteins
  • Predicted intracellular proteins
  • Predicted membrane proteins
  • Predicted secreted proteins

Protein Domains for PIGT Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for PIGT Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q969N2

UniProtKB/Swiss-Prot:

PIGT_HUMAN :
  • Belongs to the PIGT family.
Family:
  • Belongs to the PIGT family.
genes like me logo Genes that share domains with PIGT: view

Function for PIGT Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for PIGT Gene

UniProtKB/Swiss-Prot Function:
Component of the GPI transamidase complex. Essential for transfer of GPI to proteins, particularly for formation of carbonyl intermediates.

Phenotypes From GWAS Catalog for PIGT Gene

Gene Ontology (GO) - Molecular Function for PIGT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003923 contributes_to GPI-anchor transamidase activity TAS 11483512
GO:0005515 protein binding IPI 11483512
genes like me logo Genes that share ontologies with PIGT: view
genes like me logo Genes that share phenotypes with PIGT: view

Human Phenotype Ontology for PIGT Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Models for PIGT Gene

MGI Knock Outs for PIGT:

miRNA for PIGT Gene

miRTarBase miRNAs that target PIGT

Clone Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for PIGT Gene

Localization for PIGT Gene

Subcellular locations from UniProtKB/Swiss-Prot for PIGT Gene

Endoplasmic reticulum membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for PIGT gene
Compartment Confidence
endoplasmic reticulum 5
plasma membrane 3
lysosome 3
extracellular 2
peroxisome 1

Gene Ontology (GO) - Cellular Components for PIGT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005783 endoplasmic reticulum IEA --
GO:0005789 endoplasmic reticulum membrane TAS --
GO:0016020 membrane IEA,HDA 19946888
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with PIGT: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for PIGT Gene

Pathways & Interactions for PIGT Gene

genes like me logo Genes that share pathways with PIGT: view

UniProtKB/Swiss-Prot Q969N2-PIGT_HUMAN

  • Pathway: Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis.

Gene Ontology (GO) - Biological Process for PIGT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006506 GPI anchor biosynthetic process IEA --
GO:0016255 attachment of GPI anchor to protein TAS,IEA 11483512
GO:0030182 neuron differentiation IEA --
GO:0051402 neuron apoptotic process IEA --
genes like me logo Genes that share ontologies with PIGT: view

No data available for SIGNOR curated interactions for PIGT Gene

Drugs & Compounds for PIGT Gene

Products:

  1. Drug

(3) Drugs for PIGT Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Sphingosine Experimental Pharma 0
sphinganine Pharma 0
sphingosine 1-phosphate Pharma Full agonist, Agonist 0

(841) Additional Compounds for PIGT Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
3-Dehydrosphinganine
  • (2S)-2-amino-1-hydroxyoctadecan-3-one
  • 1-Hydroxy-2-amino-3-oxo-octadecane
  • 2-Amino-1-hydroxy-3-Octadecanone
  • 3-Dehydro-D-sphinganine
  • 3-Dehydrosphinganine
 16105-69-4
3-O-Sulfogalactosylceramide (d18:1/12:0)
  • 3'-O-Sulphogalactosylceramide
  • 3-O-Sulfo-beta-D-galactosylceramide
  • 3-O-Sulfo-beta-delta-galactosylceramide
  • 3-O-Sulfogalactosylceramide
  • Cerebroside 3-sulfate
 852100-88-0
3-O-Sulfogalactosylceramide (d18:1/14:0)
  • 3'-O-Sulphogalactosylceramide
  • 3-O-Sulfo-beta-D-galactosylceramide
  • 3-O-Sulfo-beta-delta-galactosylceramide
  • 3-O-Sulfogalactosylceramide
  • Cerebroside 3-sulfate
3-O-Sulfogalactosylceramide (d18:1/16:0)
  • 3'-O-Sulphogalactosylceramide
  • 3-O-Sulfo-beta-D-galactosylceramide
  • 3-O-Sulfo-beta-delta-galactosylceramide
  • 3-O-Sulfogalactosylceramide
  • Cerebroside 3-sulfate
 862509-48-6
3-O-Sulfogalactosylceramide (d18:1/18:0)
  • 3'-O-Sulphogalactosylceramide
  • 3-O-Sulfo-beta-D-galactosylceramide
  • 3-O-Sulfo-beta-delta-galactosylceramide
  • 3-O-Sulfogalactosylceramide
  • Cerebroside 3-sulfate
 244215-65-4
genes like me logo Genes that share compounds with PIGT: view

Transcripts for PIGT Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for PIGT Gene

(6) REFSEQ mRNAs :
(30) Additional mRNA sequences :
(600) Selected AceView cDNA sequences:
(72) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PIGT Gene

Phosphatidylinositol glycan anchor biosynthesis, class T:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIGT Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2a · 2b · 2c · 2d ^ 3a · 3b · 3c ^ 4a · 4b · 4c · 4d ^ 5a · 5b · 5c ^ 6a · 6b · 6c ^ 7a · 7b ^ 8a ·
SP1: - - - -
SP2: - - - - - - -
SP3: - - -
SP4: - - - - - - - - - -
SP5: - - - - -
SP6: - - - - - - - - -
SP7: - - - - - - - -
SP8: - - - -
SP9: - -
SP10: - - - - - - - - -
SP11: - - - - - - -
SP12: - - - - - - - - - -
SP13: - - - - -
SP14: - - - -
SP15: - - - - - - - -
SP16: - - - -
SP17:
SP18: - - -
SP19:
SP20:
SP21: - - - - -
SP22:

ExUns: 8b · 8c · 8d ^ 9a · 9b ^ 10a · 10b ^ 11a · 11b ^ 12a · 12b ^ 13
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17: - -
SP18:
SP19: -
SP20: - - -
SP21:
SP22:

Relevant External Links for PIGT Gene

GeneLoc Exon Structure for
PIGT
ECgene alternative splicing isoforms for
PIGT

Expression for PIGT Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PIGT Gene

mRNA expression in normal human tissues for PIGT Gene
mRNA expression by GTEx for PIGT GenemRNA expression by BioGPS for PIGT Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for PIGT Gene

This gene is overexpressed in Bone (8.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for PIGT Gene



Protein tissue co-expression partners for PIGT Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of PIGT Gene:

PIGT

SOURCE GeneReport for Unigene cluster for PIGT Gene:

Hs.437388

Evidence on tissue expression from TISSUES for PIGT Gene

  • Nervous system(5)
  • Skin(4.6)
  • Blood(4.5)
  • Liver(4.3)
  • Intestine(3.8)
  • Lung(3.1)
  • Kidney(2.8)
  • Pancreas(2.7)
  • Spleen(2.4)
  • Heart(2.1)
  • Muscle(2.1)
  • Stomach(2)

Phenotype-based relationships between genes and organs from Gene ORGANizer for PIGT Gene

Germ Layers:
  • ectoderm
  • endoderm
  • mesoderm
Systems:
  • cardiovascular
  • digestive
  • immune
  • integumentary
  • nervous
  • respiratory
  • skeletal muscle
  • skeleton
  • urinary
Organs:
Head and neck:
  • brain
  • cerebellum
  • cranial nerve
  • ear
  • eye
  • face
  • forehead
  • head
  • jaw
  • lip
  • mandible
  • maxilla
  • meninges
  • mouth
  • neck
  • nose
  • skull
  • tooth
Thorax:
  • breast
  • chest wall
  • clavicle
  • heart
  • heart valve
  • lung
  • rib
  • rib cage
  • scapula
  • sternum
Abdomen:
  • duodenum
  • intestine
  • kidney
  • large intestine
  • pancreas
  • small intestine
  • stomach
Pelvis:
  • pelvis
  • rectum
  • ureter
Limb:
  • ankle
  • arm
  • digit
  • elbow
  • femur
  • fibula
  • finger
  • foot
  • forearm
  • hand
  • hip
  • humerus
  • knee
  • lower limb
  • radius
  • shin
  • shoulder
  • thigh
  • tibia
  • toe
  • ulna
  • upper limb
  • wrist
General:
  • blood
  • blood vessel
  • peripheral nervous system
  • red blood cell
  • skin
  • spinal column
  • vertebrae
  • white blood cell
genes like me logo Genes that share expression patterns with PIGT: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for PIGT Gene

Orthologs for PIGT Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for PIGT Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia PIGT 33 34
  • 99.77 (n)
cow
(Bos Taurus)
 Mammalia PIGT 33 34
  • 90.23 (n)
rat
(Rattus norvegicus)
 Mammalia Pigt 33
  • 89.21 (n)
dog
(Canis familiaris)
 Mammalia PIGT 33 34
  • 88.91 (n)
mouse
(Mus musculus)
 Mammalia Pigt 33 16 34
  • 88.31 (n)
platypus
(Ornithorhynchus anatinus)
 Mammalia PIGT 34
  • 85 (a)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia PIGT 34
  • 80 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves PIGT 33 34
  • 74.46 (n)
lizard
(Anolis carolinensis)
 Reptilia PIGT 34
  • 77 (a)
 OneToOne
tropical clawed frog
(Silurana tropicalis)
 Amphibia pigt 33
  • 69 (n)
Str.4301 33
zebrafish
(Danio rerio)
 Actinopterygii pigt 33 34
  • 67.82 (n)
African malaria mosquito
(Anopheles gambiae)
 Insecta AgaP_AGAP008540 33
  • 53.39 (n)
fruit fly
(Drosophila melanogaster)
 Insecta CG11190 34 33
  • 50.72 (n)
 OneToOne
worm
(Caenorhabditis elegans)
 Secernentea F17C11.7 34
  • 26 (a)
 OneToOne
A. gosspyii yeast
(Ashbya gossypii)
 Saccharomycetes AGOS_ADR333C 33
  • 48.3 (n)
baker's yeast
(Saccharomyces cerevisiae)
 Saccharomycetes GPI16 33 34 36
  • 46.78 (n)
K. lactis yeast
(Kluyveromyces lactis)
 Saccharomycetes KLLA0A09515g 33
  • 45.26 (n)
thale cress
(Arabidopsis thaliana)
 eudicotyledons AT3G07140 33
  • 46.69 (n)
rice
(Oryza sativa)
 Liliopsida Os11g0479232 33
  • 45.07 (n)
bread mold
(Neurospora crassa)
 Ascomycetes NCU05644 33
  • 50.32 (n)
Species where no ortholog for PIGT was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for PIGT Gene

ENSEMBL:
Gene Tree for PIGT (if available)
TreeFam:
Gene Tree for PIGT (if available)

Paralogs for PIGT Gene

No data available for Paralogs for PIGT Gene

Variants for PIGT Gene

Sequence variations from dbSNP and Humsavar for PIGT Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs141420243 benign, likely-benign, not specified, not provided 45,418,853(+) G/A/T coding_sequence_variant, intron_variant, missense_variant, non_coding_transcript_variant
rs527236031 pathogenic, Multiple congenital anomalies-hypotonia-seizures syndrome 3 45,424,323(+) C/T coding_sequence_variant, missense_variant, non_coding_transcript_variant
rs527236032 pathogenic, Multiple congenital anomalies-hypotonia-seizures syndrome 3 45,420,579(+) /T coding_sequence_variant, frameshift, non_coding_transcript_variant
rs574183358 uncertain-significance, Multiple congenital anomalies-hypotonia-seizures syndrome 3, Paroxysmal nocturnal hemoglobinuria 2 45,419,543(+) C/T 5_prime_UTR_variant, coding_sequence_variant, missense_variant, non_coding_transcript_variant
rs587777027 pathogenic, Multiple congenital anomalies-hypotonia-seizures syndrome 3, Multiple congenital anomalies-hypotonia-seizures syndrome 3 (MCAHS3) [MIM:615398] 45,419,348(+) A/C 5_prime_UTR_variant, coding_sequence_variant, intron_variant, missense_variant, non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for PIGT Gene

Variant ID Type Subtype PubMed ID
dgv4319n100 CNV gain 25217958
nsv1056102 CNV loss 25217958

Variation tolerance for PIGT Gene

Residual Variation Intolerance Score: 34.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.52; 64.67% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for PIGT Gene

Human Gene Mutation Database (HGMD)
PIGT
SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIGT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PIGT Gene

Disorders for PIGT Gene

MalaCards: The human disease database

(6) MalaCards diseases for PIGT Gene - From: HGMD, OMIM, ClinVar, GTR, Orphanet, Swiss-Prot, DISEASES, and GeneCards

- elite association - COSMIC cancer census association via MalaCards
Search PIGT in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

PIGT_HUMAN
  • Multiple congenital anomalies-hypotonia-seizures syndrome 3 (MCAHS3) [MIM:615398]: An autosomal recessive syndrome characterized by distinct facial features, intellectual disability, hypotonia and seizures, in combination with abnormal skeletal, endocrine, and ophthalmologic findings including impaired vision, as well as abnormal motility of the eyes. {ECO:0000269 PubMed:23636107}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • Paroxysmal nocturnal hemoglobinuria 2 (PNH2) [MIM:615399]: A disorder characterized by hemolytic anemia with hemoglobinuria, thromboses in large vessels, and a deficiency in hematopoiesis. Red blood cell breakdown with release of hemoglobin into the urine is manifested most prominently by dark-colored urine in the morning. {ECO:0000269 PubMed:23733340}. Note=Disease susceptibility is associated with variations affecting the gene represented in this entry.

Additional Disease Information for PIGT

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with PIGT: view

No data available for Genatlas for PIGT Gene

Publications for PIGT Gene

  1. Two subunits of glycosylphosphatidylinositol transamidase, GPI8 and PIG-T, form a functionally important intermolecular disulfide bridge. (PMID: 12582175) Ohishi K … Kinoshita T (The Journal of biological chemistry 2003) 3 4 22 58
  2. A case of paroxysmal nocturnal hemoglobinuria caused by a germline mutation and a somatic mutation in PIGT. (PMID: 23733340) Krawitz PM … Schrezenmeier H (Blood 2013) 3 4 58
  3. A novel intellectual disability syndrome caused by GPI anchor deficiency due to homozygous mutations in PIGT. (PMID: 23636107) Kvarnung M … Nordgren A (Journal of medical genetics 2013) 3 4 58
  4. The novel neurotrophin-regulated neuronal development-associated protein, NDAP, mediates apoptosis. (PMID: 16516892) Li HL … Yu AC (FEBS letters 2006) 3 22 58
  5. Endoplasmic reticulum localization of Gaa1 and PIG-T, subunits of the glycosylphosphatidylinositol transamidase complex. (PMID: 15713669) Vainauskas S … Menon AK (The Journal of biological chemistry 2005) 2 3 58

Products for PIGT Gene

Sources for PIGT Gene

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