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Aliases for PHF5EP Gene

Aliases for PHF5EP Gene

  • PHD Finger Protein 5E Pseudogene 2 3
  • AC139451.1 5

External Ids for PHF5EP Gene

Previous GeneCards Identifiers for PHF5EP Gene

  • GC03P049788

Summaries for PHF5EP Gene

GeneCards Summary for PHF5EP Gene

PHF5EP (PHD Finger Protein 5E Pseudogene) is a Pseudogene.

Additional gene information for PHF5EP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PHF5EP Gene

Genomics for PHF5EP Gene

Regulatory Elements for PHF5EP Gene

Enhancers for PHF5EP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H049338 1.9 FANTOM5 ENCODE dbSUPER 14.6 -429.2 -429207 14.7 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 AMT QRICH1 ATRIP ENSG00000235236 WDR6 RBM6 BSN-AS1 DALRD3 RBM5 IP6K2
GH03H049016 1.4 ENCODE dbSUPER 14.6 -755.0 -754996 6.8 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 ZBTB7B YY1 WDR6 ENSG00000235236 NICN1 FCF1P2 QRICH1 RBM6 ZNF589 ENSG00000223343 P4HTM AMT
GH03H049721 1.3 ENCODE dbSUPER 11.8 -51.2 -51183 4.2 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A DMAP1 YY1 GLIS2 ELK1 FAM212A AMT PHF5EP IP6K1 TRAIP MST1 GC03M049732 GMPPB PIR51040
GH03H049686 1.3 ENCODE dbSUPER 11.1 -86.9 -86909 4.2 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 AMT RBM6 QRICH1 CDHR4 AMIGO3 GMPPB IMPDH2 USP19 PHF5EP IP6K1
GH03H050192 1.3 Ensembl ENCODE 9.9 +419.2 419166 4.3 PKNOX1 FOXA2 ARID4B DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS SP5 HYAL3 RBM6 GNAI2 SEMA3F-AS1 SEMA3F SEMA3B SEMA3B-AS1 LSMEM2 HYAL1 IFRD2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PHF5EP on UCSC Golden Path with GeneCards custom track

Genomic Locations for PHF5EP Gene

Genomic Locations for PHF5EP Gene
chr3:49,775,256-49,776,184
(GRCh38/hg38)
Size:
929 bases
Orientation:
Plus strand
chr3:49,812,689-49,813,509
(GRCh37/hg19)

Genomic View for PHF5EP Gene

Genes around PHF5EP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PHF5EP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PHF5EP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PHF5EP Gene

Proteins for PHF5EP Gene

Post-translational modifications for PHF5EP Gene

No Post-translational modifications

No data available for DME Specific Peptides for PHF5EP Gene

Domains & Families for PHF5EP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PHF5EP Gene

Function for PHF5EP Gene

Phenotypes From GWAS Catalog for PHF5EP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PHF5EP Gene

Localization for PHF5EP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PHF5EP Gene

Pathways & Interactions for PHF5EP Gene

SuperPathways for PHF5EP Gene

No Data Available

Interacting Proteins for PHF5EP Gene

Gene Ontology (GO) - Biological Process for PHF5EP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PHF5EP Gene

Drugs & Compounds for PHF5EP Gene

No Compound Related Data Available

Transcripts for PHF5EP Gene

mRNA/cDNA for PHF5EP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PHF5EP Gene

No ASD Table

Relevant External Links for PHF5EP Gene

GeneLoc Exon Structure for
PHF5EP
ECgene alternative splicing isoforms for
PHF5EP

Expression for PHF5EP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PHF5EP Gene

NURSA nuclear receptor signaling pathways regulating expression of PHF5EP Gene:

PHF5EP
genes like me logo Genes that share expression patterns with PHF5EP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PHF5EP Gene

Orthologs for PHF5EP Gene

Evolution for PHF5EP Gene

ENSEMBL:
Gene Tree for PHF5EP (if available)
TreeFam:
Gene Tree for PHF5EP (if available)

No data available for Orthologs for PHF5EP Gene

Paralogs for PHF5EP Gene

No data available for Paralogs for PHF5EP Gene

Variants for PHF5EP Gene

Relevant External Links for PHF5EP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PHF5EP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PHF5EP Gene

Disorders for PHF5EP Gene

No disorders were found for PHF5EP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PHF5EP Gene

Publications for PHF5EP Gene

  1. Identification and characterization of a novel murine multigene family containing a PHD-finger-like motif. (PMID: 12054543) Trappe R … Engel W (Biochemical and biophysical research communications 2002) 3 60

Products for PHF5EP Gene

Sources for PHF5EP Gene

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