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Aliases for PGM1 Gene

Aliases for PGM1 Gene

  • Phosphoglucomutase 1 2 3
  • Glucose Phosphomutase 1 3 4
  • EC 4 63
  • PGM 1 3 4
  • EC 5.4.2 63
  • CDG1T 3
  • GSD14 3

External Ids for PGM1 Gene

Previous GeneCards Identifiers for PGM1 Gene

  • GC01P063990
  • GC01P062978
  • GC01P063416
  • GC01P063428
  • GC01P063770
  • GC01P063831
  • GC01P064058
  • GC01P062166

Summaries for PGM1 Gene

Entrez Gene Summary for PGM1 Gene

  • The protein encoded by this gene is an isozyme of phosphoglucomutase (PGM) and belongs to the phosphohexose mutase family. There are several PGM isozymes, which are encoded by different genes and catalyze the transfer of phosphate between the 1 and 6 positions of glucose. In most cell types, this PGM isozyme is predominant, representing about 90% of total PGM activity. In red cells, PGM2 is a major isozyme. This gene is highly polymorphic. Mutations in this gene cause glycogen storage disease type 14. Alternativley spliced transcript variants encoding different isoforms have been identified in this gene.[provided by RefSeq, Mar 2010]

GeneCards Summary for PGM1 Gene

PGM1 (Phosphoglucomutase 1) is a Protein Coding gene. Diseases associated with PGM1 include congenital disorder of glycosylation, type it and fetal macrosomia. Among its related pathways are Metabolism and Glycosaminoglycan metabolism. GO annotations related to this gene include magnesium ion binding and phosphoglucomutase activity. An important paralog of this gene is PGM5.

UniProtKB/Swiss-Prot for PGM1 Gene

  • This enzyme participates in both the breakdown and synthesis of glucose

Gene Wiki entry for PGM1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PGM1 Gene

Genomics for PGM1 Gene

Regulatory Elements for PGM1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for PGM1 Gene

63,593,276 bp from pter
63,660,245 bp from pter
66,970 bases
Plus strand

Genomic View for PGM1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PGM1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGM1 Gene

Proteins for PGM1 Gene

  • Protein details for PGM1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein Accession:
    Secondary Accessions:
    • B2R5N9
    • B4DPV0
    • Q16105
    • Q16106
    • Q5BKZ9
    • Q6NW22
    • Q86U74
    • Q96J40
    • Q9NTY4

    Protein attributes for PGM1 Gene

    562 amino acids
    Molecular mass:
    61449 Da
    Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Note=Binds 1 Mg(2+) ion per subunit.;
    Quaternary structure:
    • Monomer
    • Sequence=AAH90856.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for PGM1 Gene


neXtProt entry for PGM1 Gene

Proteomics data for PGM1 Gene at MOPED

Post-translational modifications for PGM1 Gene

  • Phosphorylation at Thr-467 by PAK1 significantly enhances enzymatic activity.
  • Ubiquitination at Lys 146, Lys 349, and Lys 419
  • Modification sites at PhosphoSitePlus

Other Protein References for PGM1 Gene

Antibody Products

Domains & Families for PGM1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the phosphohexose mutase family.
  • Belongs to the phosphohexose mutase family.
genes like me logo Genes that share domains with PGM1: view

No data available for Gene Families for PGM1 Gene

Function for PGM1 Gene

Molecular function for PGM1 Gene

GENATLAS Biochemistry:
phosphoglucomutase 1,highly polymorphic
UniProtKB/Swiss-Prot CatalyticActivity:
Alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate
UniProtKB/Swiss-Prot Function:
This enzyme participates in both the breakdown and synthesis of glucose

Enzyme Numbers (IUBMB) for PGM1 Gene

Gene Ontology (GO) - Molecular Function for PGM1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000287 magnesium ion binding IEA --
GO:0004614 phosphoglucomutase activity TAS 8257433
GO:0016868 intramolecular transferase activity, phosphotransferases --
genes like me logo Genes that share ontologies with PGM1: view
genes like me logo Genes that share phenotypes with PGM1: view

Animal Model Products

miRNA for PGM1 Gene

miRTarBase miRNAs that target PGM1

No data available for Animal Models , Transcription Factor Targets and HOMER Transcription for PGM1 Gene

Localization for PGM1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PGM1 Gene

Isoform 1: Cytoplasm.

Subcellular locations from

Jensen Localization Image for PGM1 Gene COMPARTMENTS Subcellular localization image for PGM1 gene
Compartment Confidence
extracellular 5
cytoskeleton 4
cytosol 3
nucleus 1

Gene Ontology (GO) - Cellular Components for PGM1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm NAS 1530890
GO:0005829 cytosol TAS --
GO:0015629 actin cytoskeleton IDA --
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with PGM1: view

Pathways & Interactions for PGM1 Gene

genes like me logo Genes that share pathways with PGM1: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

SIGNOR curated interactions for PGM1 Gene

Is activated by:

Gene Ontology (GO) - Biological Process for PGM1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005975 carbohydrate metabolic process TAS --
GO:0005978 glycogen biosynthetic process TAS --
GO:0005980 glycogen catabolic process TAS --
GO:0006006 glucose metabolic process TAS --
GO:0006094 gluconeogenesis TAS 8257433
genes like me logo Genes that share ontologies with PGM1: view

Drugs & Compounds for PGM1 Gene

(6) Drugs for PGM1 Gene - From: HMDB and DrugBank

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Alpha-D-Glucose 1,6-bisphosphate Experimental Pharma Target 0
Alpha-D-Glucose-1-Phosphate-6-Vanadate Experimental Pharma Target 0
Glucose 1-phosphate Experimental Pharma 0
Glucose 6-phosphate Experimental Pharma 0
ribose 1-phosphate Experimental Pharma 0

(9) Additional Compounds for PGM1 Gene - From: NovoSeek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
  • Roferose ST
  • (+)-Glucose
  • Anhydrous dextrose
  • Cerelose
  • Cerelose 2001
D-Ribose 5-phosphate
  • D-Ribose 5-phosphate
  • D-Ribose-5-P
  • D-Ribose-5-phosphate
  • D-Ribose-5-phosphorate
  • D-Ribose-5-phosphoric acid
D-Ribulose 5-phosphate
  • alpha-D-Ribose 5-phosphate
  • D-Ribulose 5-phosphate
  • Erythro-Pentulose 5-phosphate
  • Ribulose 5-phosphate
  • Ribulose phosphate
genes like me logo Genes that share compounds with PGM1: view

Transcripts for PGM1 Gene

Unigene Clusters for PGM1 Gene

Phosphoglucomutase 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for PGM1 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11
SP1: - - -

Relevant External Links for PGM1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for PGM1 Gene

mRNA expression in normal human tissues for PGM1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for PGM1 Gene

This gene is overexpressed in Muscle - Skeletal (x14.5).

Protein differential expression in normal tissues from HIPED for PGM1 Gene

This gene is overexpressed in Liver, secretome (10.6) and Tonsil (6.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for PGM1 Gene

SOURCE GeneReport for Unigene cluster for PGM1 Gene Hs.1869

genes like me logo Genes that share expression patterns with PGM1: view

Protein tissue co-expression partners for PGM1 Gene

Primer Products

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for PGM1 Gene

Orthologs for PGM1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for PGM1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia PGM1 35
  • 86.81 (n)
  • 89.84 (a)
PGM1 36
  • 96 (a)
(Canis familiaris)
Mammalia PGM1 35
  • 91.15 (n)
  • 95.86 (a)
PGM1 36
  • 86 (a)
(Mus musculus)
Mammalia Pgm2 35
  • 85.38 (n)
  • 91.44 (a)
Pgm2 16
Pgm2 36
  • 91 (a)
(Pan troglodytes)
Mammalia PGM1 35
  • 99.37 (n)
  • 99.31 (a)
PGM1 36
  • 99 (a)
(Rattus norvegicus)
Mammalia Pgm1 35
  • 84.85 (n)
  • 91.09 (a)
(Monodelphis domestica)
Mammalia PGM1 36
  • 82 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 89 (a)
-- 36
  • 73 (a)
-- 36
  • 73 (a)
(Gallus gallus)
Aves PGM1 35
  • 78.02 (n)
  • 86.49 (a)
PGM1 36
  • 80 (a)
(Anolis carolinensis)
Reptilia PGM1 36
  • 86 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia pgm1 35
  • 74.93 (n)
  • 86.27 (a)
African clawed frog
(Xenopus laevis)
Amphibia pgm2-prov 35
(Danio rerio)
Actinopterygii pgm1 35
  • 70.97 (n)
  • 79.03 (a)
zgc63718 35
pgm1 36
  • 79 (a)
fruit fly
(Drosophila melanogaster)
Insecta Pgm 37
  • 59 (a)
Pgm 35
  • 58.92 (n)
  • 59.1 (a)
Pgm 36
  • 58 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP005860 35
  • 57.52 (n)
  • 60.36 (a)
(Caenorhabditis elegans)
Secernentea R05F9.6 37
  • 58 (a)
R05F9.6 35
  • 58 (n)
  • 59.27 (a)
R05F9.6 36
  • 57 (a)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ABL029W 35
  • 54.95 (n)
  • 51.83 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0B12694g 35
  • 53.59 (n)
  • 53.16 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes PGM2 35
  • 53.73 (n)
  • 52.46 (a)
PGM1 36
  • 50 (a)
PGM2 36
  • 50 (a)
PGM2 38
thale cress
(Arabidopsis thaliana)
eudicotyledons PGM 35
  • 57.38 (n)
  • 58.86 (a)
(Glycine max)
eudicotyledons Gma.15483 35
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.75 35
(Hordeum vulgare)
Liliopsida Hv.804 35
(Oryza sativa)
Liliopsida Os10g0189100 35
  • 58.24 (n)
  • 59.52 (a)
(Triticum aestivum)
Liliopsida Ta.24519 35
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.5382 35
bread mold
(Neurospora crassa)
Ascomycetes NCU10058 35
  • 54.69 (n)
  • 55.49 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPBC32F12.10 35
  • 53.46 (n)
  • 54.31 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.6075 36
  • 60 (a)
Species with no ortholog for PGM1:
  • Actinobacteria (Mycobacterium tuberculosis)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)

Evolution for PGM1 Gene

Gene Tree for PGM1 (if available)
Gene Tree for PGM1 (if available)

Paralogs for PGM1 Gene

Paralogs for PGM1 Gene

(1) SIMAP similar genes for PGM1 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with PGM1: view

Variants for PGM1 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for PGM1 Gene

Many polymorphic variants of PGM1 exist. 8 different alleles are known: PGM1*1+, PGM1*1-, PGM1*2+, PGM1*2-, PGM1*3+, PGM1*3-, PGM1*7+ and PGM1*7-. The sequence of PGM1*1+ is shown here

Sequence variations from dbSNP and Humsavar for PGM1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs4643 -- 63,659,768(+) CACCA(A/C)GCATT utr-variant-3-prime
rs8294 -- 63,659,697(+) TGGTA(C/T)GTCCC utr-variant-3-prime
rs10909 -- 63,659,873(-) AGCCC(A/G)CAGGT utr-variant-3-prime
rs172610 -- 63,594,787(-) ttttg(G/T)atttt intron-variant
rs191969 -- 63,594,758(-) caccg(G/T)gttag intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PGM1 Gene

Variant ID Type Subtype PubMed ID
nsv870480 CNV Loss 21882294
nsv1143 CNV Insertion 18451855
esv2749063 CNV Deletion 23290073

Variation tolerance for PGM1 Gene

Residual Variation Intolerance Score: 56.02% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 18.88; 98.71% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for PGM1 Gene

HapMap Linkage Disequilibrium report
Human Gene Mutation Database (HGMD)

Disorders for PGM1 Gene

MalaCards: The human disease database

(8) MalaCards diseases for PGM1 Gene - From: OMIM, ClinVar, GeneTests, Swiss-Prot, DISEASES, NovoSeek, and GeneCards

Disorder Aliases PubMed IDs
congenital disorder of glycosylation, type it
  • glycogen storage disease xiv
fetal macrosomia
lymphoplasmacyte-rich meningioma
  • meningioma
tenosynovial giant cell tumor
  • giant cell tumor of tendon sheath
muscle glycogenosis
  • muscle phosphorylase kinase deficiency
- elite association
Search PGM1 in MalaCards View complete list of genes associated with diseases


  • Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921]: A multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. {ECO:0000269 PubMed:19625727, ECO:0000269 PubMed:22492991, ECO:0000269 PubMed:22976764, ECO:0000269 PubMed:24499211, ECO:0000269 PubMed:25288802}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Relevant External Links for PGM1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with PGM1: view

No data available for Genatlas for PGM1 Gene

Publications for PGM1 Gene

  1. Phosphoglucomutase 1: complete human and rabbit mRNA sequences and direct mapping of this highly polymorphic marker on human chromosome 1. (PMID: 1530890) Whitehouse D.B. … Edwards Y.H. (Proc. Natl. Acad. Sci. U.S.A. 1992) 2 23 67
  2. Differential protein expression profile in the liver of pikeperch (Sander lucioperca) larvae fed with increasing levels of phospholipids. (PMID: 20434969) Hamza N. … Kestemont P. (Comp. Biochem. Physiol. Part D Genomics Proteomics 2010) 23 67
  3. Macrophage expression in endometrium of women with and without endometriosis. (PMID: 19049988) Berbic M. … Fraser I.S. (Hum. Reprod. 2009) 23 67
  4. Muscle glycogenosis due to phosphoglucomutase 1 deficiency. (PMID: 19625727) Stojkovic T. … Laforet P. (N. Engl. J. Med. 2009) 23 67
  5. Detecting purely epistatic multi-locus interactions by an omnibus permutation test on ensembles of two-locus analyses. (PMID: 19761607) Wongseree W. … Chaiyaratana N. (BMC Bioinformatics 2009) 23 67

Products for PGM1 Gene

Sources for PGM1 Gene

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